Basic Information:

  VIRBase ID:  

VHID00432289

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-5p:  MIMAT0002182          FUT3:  NM_001382745     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-5p	FUT3
miRBase Accession/Entrez ID	MIMAT0002182	2525
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD174//FT3B//FucT-III//LE//Les

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FUT3	chr19:5842936-5842937(-) m6A 3'UTR       27773535 chr19:5842959-5842960(-) m6A 3'UTR       27773535 chr19:5843040-5843041(-) m6A 3'UTR       27773535 chr19:5843100-5843101(-) m6A 3'UTR       27773535 chr19:5843109-5843110(-) m6A 3'UTR       27773535 chr19:5843152-5843153(-) m6A 3'UTR       27773535 chr19:5843175-5843176(-) m6A 3'UTR       27773535 chr19:5843400-5843401(-) m6A 3'UTR       25456834//27773535 chr19:5843432-5843433(-) m6A 3'UTR       25456834//27773535 chr19:5843463-5843464(-) m6A 3'UTR       25456834//27773535 chr19:5843477-5843478(-) m6A 3'UTR       25456834//27773535 chr19:5843492-5843493(-) m6A 3'UTR       25456834//27773535 chr19:5843540-5843541(-) m6A 3'UTR       27773535 chr19:5843556-5843557(-) m6A 3'UTR       27773535 chr19:5843572-5843573(-) m6A 3'UTR       27773535 chr19:5843588-5843589(-) m6A 3'UTR       27773535 chr19:5843604-5843605(-) m6A 3'UTR       27773535 chr19:5843619-5843620(-) m6A 3'UTR       27773535 chr19:5843669-5843670(-) m6A 3'UTR       27773535 chr19:5843733-5843734(-) m6A 3'UTR       27773535 chr19:5844104-5844105(-) m6A CDS       27773535 chr19:5844153-5844154(-) m6A CDS       27773535 chr19:5844401-5844402(-) m6A CDS       27773535 chr19:5844539-5844540(-) m6A CDS       27773535 chr19:5844645-5844646(-) m6A CDS       27773535 chr19:5844686-5844687(-) m6A CDS       27773535 chr19:5846485-5846486(-) m6A 5'UTR//intron       27773535 chr19:5846534-5846535(-) m6A 5'UTR//intron       27773535 chr19:5846615-5846616(-) m6A 5'UTR//exon//intron       27773535 chr19:5846832-5846833(-) m6A 5'UTR//exon//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FUT3	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-5p
Interactor2: FUT3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg