Basic Information:

  VIRBase ID:  

VHID00431931

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-5p:  MIMAT0002182          AIRE:  NM_000383     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-5p	AIRE
miRBase Accession/Entrez ID	MIMAT0002182	326
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AIRE1//APECED//APS1//APSI//PGA1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AIRE	chr21:45717998(+) A-I      3'UTR chr21:45717868(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AIRE	chr21:45708378-45708379(+) m6A exon//intron       24284625 chr21:45708403-45708404(+) m6A exon//intron       24284625 chr21:45708439-45708440(+) m6A exon//intron       24284625 chr21:45708444-45708445(+) m6A exon//intron       24284625 chr21:45708531-45708532(+) m6A exon//intron       24284625 chr21:45708669-45708670(+) m6A exon//intron       24284625 chr21:45708701-45708702(+) m6A exon//intron       24284625 chr21:45708903-45708904(+) m6A exon//intron       24284625 chr21:45709225-45709226(+) m6A exon//intron       24284625 chr21:45709239-45709240(+) m6A exon//intron       24284625 chr21:45709286-45709287(+) m6A exon//intron       24284625 chr21:45709334-45709335(+) m6A exon//intron       24284625 chr21:45709354-45709355(+) m6A exon//intron       24284625 chr21:45709375-45709376(+) m6A exon//intron       24284625 chr21:45709393-45709394(+) m6A exon//intron       24284625 chr21:45709438-45709439(+) m6A exon//intron       24284625 chr21:45709458-45709459(+) m6A exon//intron       24284625 chr21:45712188-45712189(+) m6A CDS//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AIRE	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-5p
Interactor2: AIRE

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg