Basic Information:

  VIRBase ID:  

VHID00431921

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-5p:  MIMAT0002182          ANK3:  NM_001204404     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-1-5p	ANK3
miRBase Accession/Entrez ID	MIMAT0002182	288
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ANKYRIN-G//MRT37

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ANK3	chr10:61798042(-) A-I      intronic chr10:61794025(-) A-I      intronic chr10:61798043(-) A-I      intronic chr10:61793190(-) A-I      intronic chr10:61984787(-) A-I      intronic chr10:61809338(-) A-I      intronic chr10:61798148(-) A-I      intronic chr10:61792097(-) A-I      intronic chr10:61951906(-) A-I      intronic chr10:61798073(-) A-I      intronic chr10:61798072(-) A-I      intronic chr10:61798069(-) A-I      intronic chr10:61796458(-) A-I      intronic chr10:61796436(-) A-I      intronic chr10:61795543(-) A-I      intronic chr10:61792027(-) A-I      intronic chr10:61796397(-) A-I      intronic chr10:62000569(-) A-I      intronic chr10:62120385(-) A-I      intronic chr10:62119551(-) A-I      intronic chr10:62119516(-) A-I      intronic chr10:61796358(-) A-I      intronic chr10:61797910(-) A-I      intronic chr10:62116718(-) A-I      intronic chr10:62116565(-) A-I      intronic chr10:61946201(-) A-I      intronic chr10:62116564(-) A-I      intronic chr10:61796227(-) A-I      intronic chr10:62112950(-) A-I      intronic chr10:61796423(-) A-I      intronic chr10:61796224(-) A-I      intronic chr10:61795545(-) A-I      intronic chr10:61962539(-) A-I      intronic chr10:61794029(-) A-I      intronic chr10:61794084(-) A-I      intronic chr10:61795544(-) A-I      intronic chr10:61795238(-) A-I      intronic chr10:62080095(-) A-I      intronic chr10:61795531(-) A-I      intronic chr10:61795504(-) A-I      intronic chr10:62080079(-) A-I      intronic chr10:62080077(-) A-I      intronic chr10:61824573(-) A-I      intronic chr10:61795262(-) A-I      intronic chr10:61962538(-) A-I      intronic chr10:61794155(-) A-I      intronic chr10:62120279(-) A-I      intronic chr10:61794041(-) A-I      intronic chr10:61984864(-) A-I      intronic chr10:61794093(-) A-I      intronic chr10:61794043(-) A-I      intronic chr10:62076617(-) A-I      intronic chr10:61962518(-) A-I      intronic chr10:61941562(-) A-I      intronic chr10:62027904(-) A-I      intronic chr10:61940242(-) A-I      intronic chr10:61792061(-) A-I      intronic chr10:61914349(-) A-I      intronic chr10:61794042(-) A-I      intronic chr10:61794002(-) A-I      intronic chr10:61940174(-) A-I      intronic chr10:61793967(-) A-I      intronic chr10:61887697(-) A-I      intronic chr10:61914386(-) A-I      intronic chr10:61793962(-) A-I      intronic chr10:61914360(-) A-I      intronic chr10:61793932(-) A-I      intronic chr10:62052577(-) A-I      intronic chr10:61884205(-) A-I      intronic chr10:61884005(-) A-I      intronic chr10:61792070(-) A-I      intronic chr10:61877526(-) A-I      intronic chr10:62027890(-) A-I      intronic chr10:62027860(-) A-I      intronic chr10:61877510(-) A-I      intronic chr10:61877509(-) A-I      intronic chr10:61855435(-) A-I      intronic chr10:61793927(-) A-I      intronic chr10:61793210(-) A-I      intronic chr10:61793898(-) A-I      intronic chr10:61793895(-) A-I      intronic chr10:61789934(-) A-I      intronic chr10:61855263(-) A-I      intronic chr10:61851574(-) A-I      intronic chr10:61818657(-) A-I      intronic chr10:61794139(-) A-I      intronic chr10:61793256(-) A-I      intronic chr10:61962544(-) A-I      intronic chr10:61818651(-) A-I      intronic chr10:61818650(-) A-I      intronic chr10:61818637(-) A-I      intronic chr10:61793161(-) A-I      intronic chr10:61818624(-) A-I      intronic chr10:61816747(-) A-I      intronic chr10:61816745(-) A-I      intronic chr10:61793081(-) A-I      intronic chr10:61914307(-) A-I      intronic chr10:61816742(-) A-I      intronic chr10:61794033(-) A-I      intronic chr10:61937520(-) A-I      intronic chr10:61793014(-) A-I      intronic chr10:61917068(-) A-I      intronic chr10:61816688(-) A-I      intronic chr10:61980910(-) A-I      intronic chr10:61816675(-) A-I      intronic chr10:61816671(-) A-I      intronic chr10:61793013(-) A-I      intronic chr10:61816579(-) A-I      intronic chr10:61816219(-) A-I      intronic chr10:61792093(-) A-I      intronic chr10:61906426(-) A-I      intronic chr10:61984793(-) A-I      intronic chr10:61816191(-) A-I      intronic chr10:61816189(-) A-I      intronic chr10:61792193(-) A-I      intronic chr10:61792161(-) A-I      intronic chr10:61816115(-) A-I      intronic chr10:61816099(-) A-I      intronic chr10:62116704(-) A-I      intronic chr10:61888243(-) A-I      intronic chr10:61816079(-) A-I      intronic chr10:61855386(-) A-I      intronic chr10:61984859(-) A-I      intronic chr10:61816073(-) A-I      intronic chr10:61984818(-) A-I      intronic chr10:61832536(-) A-I      Syn:Pro->Pro chr10:61877525(-) A-I      intronic chr10:62112899(-) A-I      intronic chr10:61928057(-) A-I      intronic chr10:61796453(-) A-I      intronic chr10:61984780(-) A-I      intronic chr10:61793090(-) A-I      intronic chr10:61792037(-) A-I      intronic chr10:61850762(-) A-I      intronic chr10:61798114(-) A-I      intronic chr10:61855199(-) A-I      intronic chr10:61797911(-) A-I      intronic chr10:61995432(-) A-I      intronic chr10:62112002(-) A-I      intronic chr10:62116717(-) A-I      intronic chr10:61946229(-) A-I      intronic chr10:62111970(-) A-I      intronic chr10:61795185(-) A-I      intronic chr10:61793068(-) A-I      intronic chr10:62029340(-) A-I      intronic chr10:61855231(-) A-I      intronic chr10:61888363(-) A-I      intronic chr10:62119526(-) A-I      intronic chr10:61984916(-) A-I      intronic chr10:61824351(-) A-I      intronic chr10:61793107(-) A-I      intronic chr10:61795585(-) A-I      intronic chr10:61961745(-) A-I      intronic chr10:62113023(-) A-I      intronic chr10:62077141(-) A-I      intronic chr10:62112018(-) A-I      intronic chr10:61797972(-) A-I      intronic chr10:61855277(-) A-I      intronic chr10:61793933(-) A-I      intronic chr10:61796389(-) A-I      intronic chr10:61886278(-) A-I      intronic chr10:61795261(-) A-I      intronic chr10:61794138(-) A-I      intronic chr10:61893513(-) A-I      intronic chr10:61792239(-) A-I      intronic chr10:62069762(-) A-I      intronic chr10:61792184(-) A-I      intronic chr10:61792062(-) A-I      intronic chr10:61796390(-) A-I      intronic chr10:62040092(-) A-I      intronic chr10:61988107(-) A-I      intronic chr10:61796369(-) A-I      intronic chr10:61879447(-) A-I      intronic chr10:61796332(-) A-I      intronic chr10:61962444(-) A-I      intronic chr10:61795183(-) A-I      intronic chr10:61795112(-) A-I      intronic chr10:61824576(-) A-I      intronic chr10:61962583(-) A-I      intronic chr10:61962118(-) A-I      intronic chr10:61795603(-) A-I      intronic chr10:61809223(-) A-I      intronic chr10:61792241(-) A-I      intronic chr10:61962460(-) A-I      intronic chr10:61795182(-) A-I      intronic chr10:61795582(-) A-I      intronic chr10:61793151(-) A-I      intronic chr10:62056731(-) A-I      intronic chr10:61792105(-) A-I      intronic chr10:61850748(-) A-I      intronic chr10:62069775(-) A-I      intronic chr10:61793110(-) A-I      intronic chr10:62000553(-) A-I      intronic chr10:61792255(-) A-I      intronic chr10:61809090(-) A-I      intronic chr10:61796266(-) A-I      intronic chr10:61848351(-) A-I      intronic chr10:61886330(-) A-I      intronic chr10:62052603(-) A-I      intronic chr10:61795283(-) A-I      intronic chr10:61793271(-) A-I      intronic chr10:61798054(-) A-I      intronic chr10:61937531(-) A-I      intronic chr10:62077078(-) A-I      intronic chr10:62119477(-) A-I      intronic chr10:62116739(-) A-I      intronic chr10:61793069(-) A-I      intronic chr10:61887549(-) A-I      intronic chr10:61794108(-) A-I      intronic chr10:61792187(-) A-I      intronic chr10:61914490(-) A-I      intronic chr10:61988100(-) A-I      intronic chr10:61795167(-) A-I      intronic chr10:62069958(-) A-I      intronic chr10:61855253(-) A-I      intronic chr10:61798068(-) A-I      intronic chr10:61795505(-) A-I      intronic chr10:61796291(-) A-I      intronic chr10:62116605(-) A-I      intronic chr10:61796467(-) A-I      intronic chr10:61988243(-) A-I      intronic chr10:62120295(-) A-I      intronic chr10:61795135(-) A-I      intronic chr10:61984836(-) A-I      intronic chr10:61792125(-) A-I      intronic chr10:61795513(-) A-I      intronic chr10:61793221(-) A-I      intronic chr10:61946206(-) A-I      intronic chr10:62080990(-) A-I      intronic chr10:61881408(-) A-I      intronic chr10:61879491(-) A-I      intronic chr10:61889344(-) A-I      intronic chr10:61848340(-) A-I      intronic chr10:61792222(-) A-I      intronic chr10:61798140(-) A-I      intronic chr10:61793001(-) A-I      intronic chr10:61940171(-) A-I      intronic chr10:61824364(-) A-I      intronic chr10:61954975(-) A-I      intronic chr10:61795300(-) A-I      intronic chr10:61962681(-) A-I      intronic chr10:61809233(-) A-I      intronic chr10:61795224(-) A-I      intronic chr10:62040067(-) A-I      intronic chr10:62120384(-) A-I      intronic chr10:61789930(-) A-I      intronic chr10:61796483(-) A-I      intronic chr10:62027846(-) A-I      intronic chr10:62111871(-) A-I      intronic chr10:61961952(-) A-I      intronic chr10:61792129(-) A-I      intronic chr10:62067215(-) A-I      intronic chr10:61795231(-) A-I      intronic chr10:62052474(-) A-I      intronic chr10:61795527(-) A-I      intronic chr10:61794085(-) A-I      intronic chr10:61797912(-) A-I      intronic chr10:62113024(-) A-I      intronic chr10:61962613(-) A-I      intronic chr10:61962017(-) A-I      intronic chr10:61795565(-) A-I      intronic chr10:62067301(-) A-I      intronic chr10:61962517(-) A-I      intronic chr10:61940267(-) A-I      intronic chr10:61934757(-) A-I      intronic chr10:62116726(-) A-I      intronic chr10:61793056(-) A-I      intronic chr10:61934526(-) A-I      intronic chr10:62120329(-) A-I      intronic chr10:61804838(-) A-I      intronic chr10:61792884(-) A-I      intronic chr10:61804993(-) A-I      intronic chr10:61805712(-) A-I      intronic chr10:61940232(-) A-I      intronic chr10:61805645(-) A-I      intronic chr10:61797294(-) A-I      intronic chr10:62118092(-) A-I      intronic chr10:61805006(-) A-I      intronic chr10:62118914(-) A-I      intronic chr10:61824614(-) A-I      intronic chr10:62061339(-) A-I      intronic chr10:62118111(-) A-I      intronic chr10:61988038(-) A-I      intronic chr10:61804977(-) A-I      intronic chr10:61805630(-) A-I      intronic chr10:61805637(-) A-I      intronic chr10:61804872(-) A-I      intronic chr10:61795171(-) A-I      intronic chr10:61804989(-) A-I      intronic chr10:61805563(-) A-I      intronic chr10:61805009(-) A-I      intronic chr10:61804967(-) A-I      intronic chr10:62118961(-) A-I      intronic chr10:62111953(-) A-I      intronic chr10:61805730(-) A-I      intronic chr10:61805558(-) A-I      intronic chr10:61984739(-) A-I      intronic chr10:61796354(-) A-I      intronic chr10:61805530(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ANK3	chr10:61804838(-) A-I intron -    21960545 chr10:61804872(-) A-I intron -    21960545 chr10:61804890(-) A-I intron -    21960545 chr10:61805006(-) A-I intron -    21960545 chr10:61805009(-) A-I intron -    21960545 chr10:61805630(-) A-I intron -    21960545 chr10:61805637(-) A-I intron -    21960545 chr10:61805730(-) A-I intron -    21960545 chr10:62342080(-) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ANK3	chr10:61788731-61788732(-) m6A 3'UTR       27773535 chr10:61789038-61789039(-) m6A 3'UTR       27773535//22608085 chr10:61789044-61789045(-) m6A 3'UTR       27773535//22608085 chr10:61789132-61789133(-) m6A 3'UTR       24981863//27773535//22608085 chr10:61789155-61789156(-) m6A 3'UTR       24981863//27773535//22608085 chr10:61789170-61789171(-) m6A 3'UTR       24981863//27773535//22608085 chr10:61789176-61789177(-) m6A 3'UTR       24981863//27773535//22608085 chr10:61789222-61789223(-) m6A 3'UTR       24981863//27773535//22608085 chr10:61789256-61789257(-) m6A 3'UTR       24981863//27773535//22608085 chr10:61789437-61789438(-) m6A 3'UTR       27773535 chr10:61802576-61802577(-) m6A exon//intron       27773535 chr10:61802619-61802620(-) m6A exon//intron       27773535 chr10:61802643-61802644(-) m6A exon//intron       27773535 chr10:61815486-61815487(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr10:61815523-61815524(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr10:61815528-61815529(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr10:61815552-61815553(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr10:61815595-61815596(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr10:61815628-61815629(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr10:61815636-61815637(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr10:61815652-61815653(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr10:61815693-61815694(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr10:61819160-61819161(-) m6A 3'UTR//CDS//exon       27773535 chr10:61819173-61819174(-) m6A 3'UTR//CDS//exon       27773535 chr10:61819210-61819211(-) m6A CDS//exon//intron       27773535 chr10:61819295-61819296(-) m6A CDS//exon//intron       27773535 chr10:61819315-61819316(-) m6A CDS//exon//intron       27773535 chr10:61819526-61819527(-) m6A CDS//exon//intron       27773535//22608085 chr10:61819534-61819535(-) m6A CDS//exon//intron       27773535//22608085 chr10:61819541-61819542(-) m6A CDS//exon//intron       27773535//22608085 chr10:61819579-61819580(-) m6A CDS//intron       24209618//24981863//27773535//22608085 chr10:61819601-61819602(-) m6A CDS//intron       24209618//24981863//27773535//22608085 chr10:61819633-61819634(-) m6A CDS//intron       24209618//24981863//27773535//22608085 chr10:61819644-61819645(-) m6A CDS//intron       24209618//24981863//27773535//22608085 chr10:61819734-61819735(-) m6A CDS//intron       27773535//22608085 chr10:61819741-61819742(-) m6A CDS//intron       27773535//22608085 chr10:61821685-61821686(-) m6A 3'UTR//intron       22608085 chr10:61824044-61824045(-) m6A 3'UTR//CDS       27773535 chr10:61827695-61827696(-) m6A 3'UTR//CDS       27773535 chr10:61827705-61827706(-) m6A 3'UTR//CDS       27773535 chr10:61827743-61827744(-) m6A 3'UTR//CDS       27773535 chr10:61828397-61828398(-) m6A CDS//intron       27773535 chr10:61828463-61828464(-) m6A 3'UTR//CDS//intron       27773535 chr10:61828806-61828807(-) m6A CDS//intron       27773535 chr10:61828990-61828991(-) m6A CDS//intron       27773535 chr10:61829002-61829003(-) m6A CDS//intron       27773535 chr10:61829046-61829047(-) m6A CDS//intron       27773535 chr10:61829081-61829082(-) m6A CDS//intron       27773535 chr10:61829091-61829092(-) m6A CDS//intron       27773535 chr10:61829127-61829128(-) m6A CDS//intron       27773535 chr10:61830909-61830910(-) m6A CDS//intron       27773535 chr10:61830922-61830923(-) m6A CDS//intron       27773535 chr10:61830962-61830963(-) m6A CDS//intron       27773535 chr10:61830977-61830978(-) m6A CDS//intron       27773535 chr10:61832143-61832144(-) m6A CDS//intron       22575960 chr10:61832198-61832199(-) m6A CDS//intron       22575960 chr10:61832205-61832206(-) m6A CDS//intron       22575960 chr10:61832428-61832429(-) m6A CDS//intron       27773535 chr10:61832823-61832824(-) m6A CDS//intron       22575960 chr10:61835051-61835052(-) m6A CDS//intron       27773535 chr10:61835066-61835067(-) m6A CDS//intron       27773535 chr10:61835389-61835390(-) m6A CDS//intron       27773535 chr10:61835689-61835690(-) m6A CDS//intron       27773535 chr10:61835768-61835769(-) m6A CDS//intron       27773535 chr10:61840366-61840367(-) m6A CDS       24981863//27773535 chr10:61841930-61841931(-) m6A CDS//intron       27773535 chr10:61842268-61842269(-) m6A exon//intron       27773535 chr10:61842416-61842417(-) m6A CDS//exon       27773535 chr10:61842426-61842427(-) m6A CDS//exon       27773535 chr10:61842437-61842438(-) m6A CDS//exon       27773535 chr10:61842444-61842445(-) m6A CDS//exon       27773535 chr10:61842487-61842488(-) m6A CDS//exon       27773535 chr10:61843267-61843268(-) m6A CDS//exon       27773535 chr10:61843309-61843310(-) m6A CDS//exon       27773535 chr10:61843360-61843361(-) m6A CDS//exon       27773535 chr10:61898817-61898818(-) m6A 3'UTR//CDS       27773535 chr10:61898823-61898824(-) m6A 3'UTR//CDS       27773535 chr10:61899145-61899146(-) m6A 5'UTR//intron       27773535 chr10:61899201-61899202(-) m6A 5'UTR//intron       27773535 chr10:61900326-61900327(-) m6A 5'UTR//intron       24981863//22608085 chr10:61932666-61932667(-) m6A 3'UTR//CDS       27773535 chr10:61932685-61932686(-) m6A 3'UTR//CDS       27773535 chr10:62493036-62493037(-) m6A CDS//exon       25456834//27773536 chr10:62493117-62493118(-) m6A 5'UTR       25456834//27371828//27773536 chr10:62493174-62493175(-) m6A 5'UTR       25456834//24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ANK3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-1-5p
Interactor2: ANK3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg