Detail Information

Basic Information:


  VIRBase ID:  

VHID00431900

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-1-5p:           ADCY3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-1-5p ADCY3
miRBase
Accession/Entrez ID		 MIMAT0002182 109
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - AC-III//AC3//BMIQ19

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADCY3
chr2:25042177(-) A-I      3'UTR
chr2:25042696(-) A-I      3'UTR
chr2:25118670(-) A-I      intronic
chr2:25118671(-) A-I      intronic
chr2:25042717(-) A-I      3'UTR
chr2:25118088(-) A-I      intronic
chr2:25118098(-) A-I      intronic
chr2:25137337(-) A-I      intronic
chr2:25042749(-) A-I      3'UTR
chr2:25128167(-) A-I      intronic
chr2:25042716(-) A-I      3'UTR
chr2:25042167(-) A-I      3'UTR
chr2:25128206(-) A-I      intronic
chr2:25042165(-) A-I      3'UTR
chr2:25042163(-) A-I      3'UTR
chr2:25137338(-) A-I      intronic
chr2:25042757(-) A-I      3'UTR
chr2:25118668(-) A-I      intronic
chr2:25118129(-) A-I      intronic
chr2:25118138(-) A-I      intronic
chr2:25118133(-) A-I      intronic
chr2:25042192(-) A-I      3'UTR
chr2:25042742(-) A-I      3'UTR
chr2:25128224(-) A-I      intronic
chr2:25134419(-) A-I      intronic
chr2:25137321(-) A-I      intronic
chr2:25128198(-) A-I      intronic
chr2:25128174(-) A-I      intronic
chr2:25128199(-) A-I      intronic
chr2:25042186(-) A-I      3'UTR
chr2:25042178(-) A-I      3'UTR
chr2:25118084(-) A-I      intronic
chr2:25118124(-) A-I      intronic
chr2:25111791(-) A-I      intronic
chr2:25127687(-) A-I      intronic
chr2:25086502(-) A-I      intronic
chr2:25089334(-) A-I      intronic
chr2:25092390(-) A-I      intronic
chr2:25084076(-) A-I      intronic
chr2:25083937(-) A-I      intronic
chr2:25086993(-) A-I      intronic
chr2:25089327(-) A-I      intronic
chr2:25111826(-) A-I      intronic
chr2:25115354(-) A-I      intronic
chr2:25115783(-) A-I      intronic
chr2:25116131(-) A-I      intronic
chr2:25116157(-) A-I      intronic
chr2:25116555(-) A-I      intronic
chr2:25116696(-) A-I      intronic
chr2:25117235(-) A-I      intronic
chr2:25092470(-) A-I      intronic
chr2:25099058(-) A-I      intronic
chr2:25118619(-) A-I      intronic
chr2:25118627(-) A-I      intronic
chr2:25118659(-) A-I      intronic
chr2:25118662(-) A-I      intronic
chr2:25118663(-) A-I      intronic
chr2:25118664(-) A-I      intronic
chr2:25118672(-) A-I      intronic
chr2:25123852(-) A-I      intronic
chr2:25123921(-) A-I      intronic
chr2:25127250(-) A-I      intronic
chr2:25127346(-) A-I      intronic
chr2:25127679(-) A-I      intronic
chr2:25129054(-) A-I      intronic
chr2:25127728(-) A-I      intronic
chr2:25127729(-) A-I      intronic
chr2:25099078(-) A-I      intronic
chr2:25099150(-) A-I      intronic
chr2:25086912(-) A-I      intronic
chr2:25127737(-) A-I      intronic
chr2:25128095(-) A-I      intronic
chr2:25128135(-) A-I      intronic
chr2:25139368(-) A-I      intronic
chr2:25111619(-) A-I      intronic
chr2:25137298(-) A-I      intronic
chr2:25137297(-) A-I      intronic
chr2:25134457(-) A-I      intronic
chr2:25134443(-) A-I      intronic
chr2:25134432(-) A-I      intronic
chr2:25133244(-) A-I      intronic
chr2:25133243(-) A-I      intronic
chr2:25139294(-) A-I      intronic
chr2:25111795(-) A-I      intronic
chr2:25128141(-) A-I      intronic
chr2:25137462(-) A-I      intronic
chr2:25092442(-) A-I      intronic
chr2:25086529(-) A-I      intronic
chr2:25111630(-) A-I      intronic
chr2:25111693(-) A-I      intronic
chr2:25111695(-) A-I      intronic
chr2:25111698(-) A-I      intronic
chr2:25111712(-) A-I      intronic
chr2:25107625(-) A-I      intronic
chr2:25116671(-) A-I      intronic
chr2:25139332(-) A-I      intronic
chr2:25117297(-) A-I      intronic
chr2:25123162(-) A-I      intronic
chr2:25139296(-) A-I      intronic
chr2:25117147(-) A-I      intronic
chr2:25119010(-) A-I      intronic
chr2:25107542(-) A-I      intronic
chr2:25139403(-) A-I      intronic
chr2:25138683(-) A-I      intronic
chr2:25129068(-) A-I      intronic
chr2:25138507(-) A-I      intronic
chr2:25131063(-) A-I      intronic
chr2:25138574(-) A-I      intronic
chr2:25133787(-) A-I      intronic
chr2:25048374(-) A-I      intronic
chr2:25131079(-) A-I      intronic
chr2:25133246(-) A-I      intronic
chr2:25134645(-) A-I      intronic
chr2:25089330(-) A-I      intronic
chr2:25102177(-) A-I      intronic
chr2:25133654(-) A-I      intronic
chr2:25117180(-) A-I      intronic
chr2:25124584(-) A-I      intronic
chr2:25115255(-) A-I      intronic
chr2:25117186(-) A-I      intronic
chr2:25048332(-) A-I      intronic
chr2:25127154(-) A-I      intronic
chr2:25127277(-) A-I      intronic
chr2:25086515(-) A-I      intronic
chr2:25137461(-) A-I      intronic
chr2:25133612(-) A-I      intronic
chr2:25086455(-) A-I      intronic
chr2:25086522(-) A-I      intronic
chr2:25118074(-) A-I      intronic
chr2:25134637(-) A-I      intronic
chr2:25051894(-) A-I      intronic
chr2:25138580(-) A-I      intronic
chr2:25091481(-) A-I      intronic
chr2:25091793(-) A-I      intronic
chr2:25086546(-) A-I      intronic
chr2:25139499(-) A-I      intronic
chr2:25117344(-) A-I      intronic
chr2:25133786(-) A-I      intronic
chr2:25119246(-) A-I      intronic
chr2:25077701(-) A-I      intronic
chr2:25127287(-) A-I      intronic
chr2:25092475(-) A-I      intronic
chr2:25091871(-) A-I      intronic
chr2:25129755(-) A-I      intronic
chr2:25051890(-) A-I      intronic
chr2:25134636(-) A-I      intronic
chr2:25047745(-) A-I      intronic
chr2:25134617(-) A-I      intronic
chr2:25076533(-) A-I      intronic
chr2:25061844(-) A-I      intronic
chr2:25129064(-) A-I      intronic
chr2:25138515(-) A-I      intronic
chr2:25117183(-) A-I      intronic
chr2:25092312(-) A-I      intronic
chr2:25116641(-) A-I      intronic
chr2:25116013(-) A-I      intronic
chr2:25086482(-) A-I      intronic
chr2:25118623(-) A-I      intronic
chr2:25086899(-) A-I      intronic
chr2:25138682(-) A-I      intronic
chr2:25127675(-) A-I      intronic
chr2:25127181(-) A-I      intronic
chr2:25048371(-) A-I      intronic
chr2:25092463(-) A-I      intronic
chr2:25116615(-) A-I      intronic
chr2:25092556(-) A-I      intronic
chr2:25139413(-) A-I      intronic
chr2:25119142(-) A-I      intronic
chr2:25133188(-) A-I      intronic
chr2:25139464(-) A-I      intronic
chr2:25116177(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ADCY3
chr2:25046379(-) T-C intron -    22484847
chr2:25046727(-) T-C intron -    22484847
chr2:25047480(-) T-C intron -    22484847
chr2:25047508(-) T-C intron -    22484847
chr2:25047529(-) T-C intron -    22484847
chr2:25047637(-) T-C intron -    22484847
chr2:25047638(-) T-C intron -    22484847
chr2:25047684(-) T-C intron -    22484847
chr2:25047691(-) T-C intron -    22484847
chr2:25047709(-) T-C intron -    22484847
chr2:25047716(-) T-C intron -    22484847
chr2:25048277(-) A-G intron -    22484847
chr2:25048297(-) T-C intron -    22484847
chr2:25048333(-) T-C intron -    22484847
chr2:25048342(-) A-G intron -    22484847
chr2:25048371(-) A-G intron -    22484847
chr2:25048377(-) A-G intron -    22484847
chr2:25048407(-) T-C intron -    22484847
chr2:25051890(-) A-G intron -    22484847
chr2:25051894(-) A-G intron -    22484847
chr2:25052439(-) C-T intron -    22484847
chr2:25076527(-) G-A intron -    22484847
chr2:25077701(-) A-G intron -    22484847
chr2:25086455(-) A-G intron -    22484847
chr2:25086482(-) A-G intron -    22484847
chr2:25086509(-) T-C intron -    22484847
chr2:25086515(-) A-G intron -    22484847
chr2:25086522(-) A-G intron -    22484847
chr2:25086546(-) A-G intron -    22484847
chr2:25087062(-) T-C intron -    22484847
chr2:25087106(-) A-G intron -    22484847
chr2:25087124(-) A-G intron -    22484847
chr2:25088143(-) T-C intron -    22484847
chr2:25091347(-) A-G intron -    22484847
chr2:25091420(-) A-G intron -    22484847
chr2:25091481(-) A-G intron -    22484847
chr2:25091793(-) A-G intron -    22484847
chr2:25091799(-) A-G intron -    22484847
chr2:25091830(-) A-G intron -    22484847
chr2:25091871(-) A-G intron -    22484847
chr2:25092312(-) A-G intron -    22484847
chr2:25092463(-) A-G intron -    22484847
chr2:25092474(-) A-G intron -    22484847
chr2:25092475(-) A-G intron -    22484847
chr2:25092556(-) A-G intron -    22484847
chr2:25093214(-) C-T intron -    22484847
chr2:25102177(-) A-G intron -    22484847
chr2:25115255(-) A-G intron -    22484847
chr2:25116703(-) A-G intron -    22484847
chr2:25117297(-) A-G intron -    22484847
chr2:25118074(-) A-G intron -    22484847
chr2:25119010(-) A-G intron -    22484847
chr2:25127154(-) A-G intron -    22484847
chr2:25127181(-) A-G intron -    22484847
chr2:25127196(-) A-G intron -    22484847
chr2:25127233(-) A-G intron -    22484847
chr2:25127328(-) A-G intron -    22484847
chr2:25127586(-) A-G intron -    22484847
chr2:25127603(-) A-G intron -    22484847
chr2:25127630(-) G-A intron -    22484847
chr2:25127675(-) A-G intron -    22484847
chr2:25127680(-) A-G intron -    22484847
chr2:25127703(-) A-G intron -    22484847
chr2:25129064(-) A-G intron -    22484847
chr2:25129068(-) A-G intron -    22484847
chr2:25129162(-) A-G intron -    22484847
chr2:25134637(-) A-G intron -    22484847
chr2:25134645(-) A-G intron -    22484847
chr2:25138507(-) A-G intron -    22484847
chr2:25138529(-) A-G intron -    22484847
chr2:25138570(-) A-G intron -    22484847
chr2:25139296(-) A-G intron -    22484847
chr2:25139332(-) A-G intron -    22484847
chr2:25139385(-) A-G intron -    22484847
chr2:25139403(-) A-G intron -    22484847
chr2:25139413(-) A-G intron -    22484847
chr2:25139464(-) A-G intron -    22484847
chr2:25139499(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADCY3
chr2:25042272-25042273(-) m6A 3'UTR       24284625//24209618//25456834
chr2:25042296-25042297(-) m6A 3'UTR       24284625//24209618//25456834//24981863
chr2:25042395-25042396(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085
chr2:25042415-25042416(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085
chr2:25042453-25042454(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:25042485-25042486(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr2:25042575-25042576(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085
chr2:25042685-25042686(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:25042700-25042701(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:25042746-25042747(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr2:25042773-25042774(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr2:25042810-25042811(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr2:25042970-25042971(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25043280-25043281(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22608085
chr2:25043348-25043349(-) m6A exon//intron       24284625//24209618//25456834//22608085
chr2:25043415-25043416(-) m6A exon//intron       24284625//24209618//24981863//22608085
chr2:25043491-25043492(-) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25043534-25043535(-) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25043540-25043541(-) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25043545-25043546(-) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25043558-25043559(-) m6A exon//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25043670-25043671(-) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25043710-25043711(-) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25044504-25044505(-) m6A CDS//exon       24284625//24209618
chr2:25047386-25047387(-) m6A CDS       22608085
chr2:25047396-25047397(-) m6A CDS       22608085
chr2:25050953-25050954(-) m6A CDS//exon//intron       22575960//22608085
chr2:25051003-25051004(-) m6A CDS//exon//intron       22575960//22608085
chr2:25053581-25053582(-) m6A CDS//exon       22575960//22608085
chr2:25053632-25053633(-) m6A CDS//exon       22575960//22608085
chr2:25053648-25053649(-) m6A CDS//exon       22608085
chr2:25057755-25057756(-) m6A CDS       24284625//27773536
chr2:25059856-25059857(-) m6A CDS//exon       24284625
chr2:25061342-25061343(-) m6A CDS//exon       24284625
chr2:25061381-25061382(-) m6A CDS//exon       24284625
chr2:25061461-25061462(-) m6A CDS//exon       24284625
chr2:25062766-25062767(-) Am CDS//exon       -
chr2:25062837-25062838(-) Y CDS//exon       26075521
chr2:25062867-25062868(-) m6A CDS//exon       24284625
chr2:25062877-25062878(-) m6A CDS//exon       24284625
chr2:25062883-25062884(-) m6A CDS//exon       24284625
chr2:25065170-25065171(-) m6A CDS//exon       27371828//27773536
chr2:25065192-25065193(-) Am CDS//exon       -
chr2:25065197-25065198(-) m6A CDS//exon       27371828//27773536
chr2:25065248-25065249(-) m6A CDS//exon//intron       27371828//27773536
chr2:25065306-25065307(-) m6A exon//intron       27773536
chr2:25095463-25095464(-) m6A CDS//intron       -
chr2:25141383-25141384(-) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25141461-25141462(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr2:25141503-25141504(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr2:25141514-25141515(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr2:25141627-25141628(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22575960//22608085
chr2:25141654-25141655(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr2:25141665-25141666(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr2:25141731-25141732(-) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25141753-25141754(-) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr2:25141845-25141846(-) m6A CDS       24284625//24981863//22575960
chr2:25141867-25141868(-) m6A 5'UTR       24284625
chr2:25141974-25141975(-) m6A 5'UTR       24284625//24981863//27773536
chr2:25142019-25142020(-) m6A 5'UTR       24284625//27773536
chr2:25142103-25142104(-) m6A 5'UTR//intron       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ADCY3
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-1-5p
Interactor2: ADCY3

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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