Detail Information

Basic Information:


  VIRBase ID:  

VHID00431477

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-11-3p:           SLC5A9:      

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Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-11-3p SLC5A9
miRBase
Accession/Entrez ID
MIMAT0002181 200010
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - SGLT4

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SLC5A9
chr1:48694931-48694932(+) m6A exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SLC5A9
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-11-3p
Interactor2: SLC5A9

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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