Basic Information:

  VIRBase ID:  

VHID00430290

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.4752

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-11-3p:  MIMAT0002181          ATAD2B:  NR_125717     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-11-3p	ATAD2B
miRBase Accession/Entrez ID	MIMAT0002181	54454
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATAD2B	chr2:24134782(-) A-I      intronic chr2:24068668(-) A-I      intronic chr2:24015694(-) A-I      intronic chr2:24015086(-) A-I      intronic chr2:24015048(-) A-I      intronic chr2:24015708(-) A-I      intronic chr2:24068663(-) A-I      intronic chr2:24068651(-) A-I      intronic chr2:23997172(-) A-I      intronic chr2:24004411(-) A-I      intronic chr2:24004887(-) A-I      intronic chr2:24015022(-) A-I      intronic chr2:24015029(-) A-I      intronic chr2:24015030(-) A-I      intronic chr2:24015038(-) A-I      intronic chr2:24104754(-) A-I      intronic chr2:24068627(-) A-I      intronic chr2:23997171(-) A-I      intronic chr2:24074137(-) A-I      intronic chr2:24074175(-) A-I      intronic chr2:24074206(-) A-I      intronic chr2:24099300(-) A-I      intronic chr2:24099310(-) A-I      intronic chr2:24104732(-) A-I      intronic chr2:24104753(-) A-I      intronic chr2:24134705(-) A-I      intronic chr2:24117207(-) A-I      intronic chr2:24116785(-) A-I      intronic chr2:24114558(-) A-I      intronic chr2:24114552(-) A-I      intronic chr2:24114537(-) A-I      intronic chr2:24114529(-) A-I      intronic chr2:24113063(-) A-I      intronic chr2:24100312(-) A-I      intronic chr2:24099874(-) A-I      intronic chr2:24099837(-) A-I      intronic chr2:24099268(-) A-I      intronic chr2:24113059(-) A-I      intronic chr2:24113022(-) A-I      intronic chr2:24112973(-) A-I      intronic chr2:24112936(-) A-I      intronic chr2:24099065(-) A-I      intronic chr2:24112196(-) A-I      intronic chr2:24110058(-) A-I      intronic chr2:24109634(-) A-I      intronic chr2:24109612(-) A-I      intronic chr2:24082317(-) A-I      intronic chr2:24082356(-) A-I      intronic chr2:24082371(-) A-I      intronic chr2:24105339(-) A-I      intronic chr2:24099037(-) A-I      intronic chr2:24098929(-) A-I      intronic chr2:24097379(-) A-I      intronic chr2:24093374(-) A-I      intronic chr2:24092994(-) A-I      intronic chr2:24092929(-) A-I      intronic chr2:24092912(-) A-I      intronic chr2:24092886(-) A-I      intronic chr2:24086041(-) A-I      intronic chr2:24085405(-) A-I      intronic chr2:24085392(-) A-I      intronic chr2:24104786(-) A-I      intronic chr2:24104679(-) A-I      intronic chr2:24100661(-) A-I      intronic chr2:24082652(-) A-I      intronic chr2:24015688(-) A-I      intronic chr2:24082798(-) A-I      intronic chr2:24084899(-) A-I      intronic chr2:23993148(-) A-I      intronic chr2:23993103(-) A-I      intronic chr2:23993100(-) A-I      intronic chr2:23993099(-) A-I      intronic chr2:23993000(-) A-I      intronic chr2:23992843(-) A-I      intronic chr2:23992804(-) A-I      intronic chr2:23992781(-) A-I      intronic chr2:24100643(-) A-I      intronic chr2:24100593(-) A-I      intronic chr2:24100579(-) A-I      intronic chr2:24100559(-) A-I      intronic chr2:24100516(-) A-I      intronic chr2:23992767(-) A-I      intronic chr2:23992691(-) A-I      intronic chr2:23992662(-) A-I      intronic chr2:23992658(-) A-I      intronic chr2:23991440(-) A-I      intronic chr2:23991359(-) A-I      intronic chr2:24004386(-) A-I      intronic chr2:24004448(-) A-I      intronic chr2:24004473(-) A-I      intronic chr2:24004785(-) A-I      intronic chr2:24004851(-) A-I      intronic chr2:24004855(-) A-I      intronic chr2:24004861(-) A-I      intronic chr2:24004864(-) A-I      intronic chr2:24004866(-) A-I      intronic chr2:24004899(-) A-I      intronic chr2:24004966(-) A-I      intronic chr2:24015000(-) A-I      intronic chr2:24015088(-) A-I      intronic chr2:24015094(-) A-I      intronic chr2:24015096(-) A-I      intronic chr2:24015189(-) A-I      intronic chr2:24015589(-) A-I      intronic chr2:24015590(-) A-I      intronic chr2:24084984(-) A-I      intronic chr2:24015733(-) A-I      intronic chr2:24015734(-) A-I      intronic chr2:24018649(-) A-I      intronic chr2:24018666(-) A-I      intronic chr2:24018673(-) A-I      intronic chr2:24018735(-) A-I      intronic chr2:24052376(-) A-I      intronic chr2:24052516(-) A-I      intronic chr2:24052525(-) A-I      intronic chr2:24052530(-) A-I      intronic chr2:24052991(-) A-I      intronic chr2:24052992(-) A-I      intronic chr2:24053121(-) A-I      intronic chr2:24057225(-) A-I      intronic chr2:24057299(-) A-I      intronic chr2:24004367(-) A-I      intronic chr2:24003642(-) A-I      intronic chr2:24057320(-) A-I      intronic chr2:24057743(-) A-I      intronic chr2:24058561(-) A-I      intronic chr2:24058626(-) A-I      intronic chr2:24058638(-) A-I      intronic chr2:24058657(-) A-I      intronic chr2:24058658(-) A-I      intronic chr2:24058698(-) A-I      intronic chr2:24058723(-) A-I      intronic chr2:24068619(-) A-I      intronic chr2:24068620(-) A-I      intronic chr2:24068673(-) A-I      intronic chr2:24071169(-) A-I      intronic chr2:24071317(-) A-I      intronic chr2:24003036(-) A-I      intronic chr2:24003032(-) A-I      intronic chr2:24003023(-) A-I      intronic chr2:24002978(-) A-I      intronic chr2:24138734(-) A-I      intronic chr2:24138666(-) A-I      intronic chr2:24138664(-) A-I      intronic chr2:24138554(-) A-I      intronic chr2:24135363(-) A-I      intronic chr2:24135269(-) A-I      intronic chr2:24135164(-) A-I      intronic chr2:24135163(-) A-I      intronic chr2:24135123(-) A-I      intronic chr2:24135122(-) A-I      intronic chr2:24134825(-) A-I      intronic chr2:24134769(-) A-I      intronic chr2:24002949(-) A-I      intronic chr2:24134653(-) A-I      intronic chr2:24134585(-) A-I      intronic chr2:24134171(-) A-I      intronic chr2:24134168(-) A-I      intronic chr2:24002912(-) A-I      intronic chr2:24002312(-) A-I      intronic chr2:24002274(-) A-I      intronic chr2:24002269(-) A-I      intronic chr2:24002246(-) A-I      intronic chr2:24099296(-) A-I      intronic chr2:24014993(-) A-I      intronic chr2:24002242(-) A-I      intronic chr2:24002241(-) A-I      intronic chr2:24002240(-) A-I      intronic chr2:24002223(-) A-I      intronic chr2:24002217(-) A-I      intronic chr2:24002213(-) A-I      intronic chr2:24002210(-) A-I      intronic chr2:24002170(-) A-I      intronic chr2:24002157(-) A-I      intronic chr2:24002149(-) A-I      intronic chr2:24002146(-) A-I      intronic chr2:24002122(-) A-I      intronic chr2:24002118(-) A-I      intronic chr2:24002093(-) A-I      intronic chr2:23998340(-) A-I      intronic chr2:23998272(-) A-I      intronic chr2:23998263(-) A-I      intronic chr2:23998251(-) A-I      intronic chr2:23998248(-) A-I      intronic chr2:23998240(-) A-I      intronic chr2:23998212(-) A-I      intronic chr2:23998147(-) A-I      intronic chr2:23998137(-) A-I      intronic chr2:23997607(-) A-I      intronic chr2:23995858(-) A-I      intronic chr2:23995786(-) A-I      intronic chr2:23995740(-) A-I      intronic chr2:24133676(-) A-I      intronic chr2:24133581(-) A-I      intronic chr2:24133568(-) A-I      intronic chr2:24133567(-) A-I      intronic chr2:24133516(-) A-I      intronic chr2:24133280(-) A-I      intronic chr2:24133213(-) A-I      intronic chr2:24133164(-) A-I      intronic chr2:24133015(-) A-I      intronic chr2:24132961(-) A-I      intronic chr2:24132916(-) A-I      intronic chr2:24122893(-) A-I      intronic chr2:24122589(-) A-I      intronic chr2:24122013(-) A-I      intronic chr2:24121979(-) A-I      intronic chr2:24121966(-) A-I      intronic chr2:24121940(-) A-I      intronic chr2:24121931(-) A-I      intronic chr2:24121827(-) A-I      intronic chr2:24074179(-) A-I      intronic chr2:24074187(-) A-I      intronic chr2:23995676(-) A-I      intronic chr2:24074204(-) A-I      intronic chr2:24074207(-) A-I      intronic chr2:24121628(-) A-I      intronic chr2:24075241(-) A-I      intronic chr2:24075245(-) A-I      intronic chr2:24075267(-) A-I      intronic chr2:24080779(-) A-I      intronic chr2:24082303(-) A-I      intronic chr2:24082307(-) A-I      intronic chr2:24120912(-) A-I      intronic chr2:24117312(-) A-I      intronic chr2:24117275(-) A-I      intronic chr2:24068604(-) A-I      intronic chr2:24015113(-) A-I      intronic chr2:24108966(-) A-I      intronic chr2:24098992(-) A-I      intronic chr2:24132939(-) A-I      intronic chr2:24068542(-) A-I      intronic chr2:24101014(-) A-I      intronic chr2:24133535(-) A-I      intronic chr2:24074178(-) A-I      intronic chr2:24072683(-) A-I      intronic chr2:23995879(-) A-I      intronic chr2:24070670(-) A-I      intronic chr2:23996220(-) A-I      intronic chr2:24063915(-) A-I      intronic chr2:24134181(-) A-I      intronic chr2:23992724(-) A-I      intronic chr2:24015112(-) A-I      intronic chr2:24133681(-) A-I      intronic chr2:24120953(-) A-I      intronic chr2:24052449(-) A-I      intronic chr2:24004435(-) A-I      intronic chr2:24004881(-) A-I      intronic chr2:24058589(-) A-I      intronic chr2:24057688(-) A-I      intronic chr2:24052952(-) A-I      intronic chr2:24074243(-) A-I      intronic chr2:24119888(-) A-I      intronic chr2:24093349(-) A-I      intronic chr2:24057170(-) A-I      intronic chr2:24004907(-) A-I      intronic chr2:24004355(-) A-I      intronic chr2:24003061(-) A-I      intronic chr2:24104740(-) A-I      intronic chr2:23996141(-) A-I      intronic chr2:24132897(-) A-I      intronic chr2:23991358(-) A-I      intronic chr2:24078659(-) A-I      intronic chr2:24004854(-) A-I      intronic chr2:23995674(-) A-I      intronic chr2:24068649(-) A-I      intronic chr2:24085353(-) A-I      intronic chr2:24086977(-) A-I      intronic chr2:24058799(-) A-I      intronic chr2:24085984(-) A-I      intronic chr2:23992936(-) A-I      intronic chr2:24018667(-) A-I      intronic chr2:23996155(-) A-I      intronic chr2:23998166(-) A-I      intronic chr2:24094926(-) A-I      intronic chr2:24004848(-) A-I      intronic chr2:24085365(-) A-I      intronic chr2:24004882(-) A-I      intronic chr2:24064584(-) A-I      intronic chr2:24052569(-) A-I      intronic chr2:24112111(-) A-I      intronic chr2:24071128(-) A-I      intronic chr2:24132848(-) A-I      intronic chr2:24109551(-) A-I      intronic chr2:24100189(-) A-I      intronic chr2:24082360(-) A-I      intronic chr2:24098949(-) A-I      intronic chr2:24098931(-) A-I      intronic chr2:23997230(-) A-I      intronic chr2:24123210(-) A-I      intronic chr2:24132889(-) A-I      intronic chr2:24064566(-) A-I      intronic chr2:24086052(-) A-I      intronic chr2:24004423(-) A-I      intronic chr2:24133675(-) A-I      intronic chr2:24004821(-) A-I      intronic chr2:24063874(-) A-I      intronic chr2:24080787(-) A-I      intronic chr2:24078814(-) A-I      intronic chr2:23992923(-) A-I      intronic chr2:24004893(-) A-I      intronic chr2:24093333(-) A-I      intronic chr2:24122011(-) A-I      intronic chr2:24004317(-) A-I      intronic chr2:24057278(-) A-I      intronic chr2:24002222(-) A-I      intronic chr2:24080744(-) A-I      intronic chr2:24004780(-) A-I      intronic chr2:24015198(-) A-I      intronic chr2:24015101(-) A-I      intronic chr2:24002970(-) A-I      intronic chr2:24112166(-) A-I      intronic chr2:24004372(-) A-I      intronic chr2:24086138(-) A-I      intronic chr2:23997068(-) A-I      intronic chr2:24086010(-) A-I      intronic chr2:24082358(-) A-I      intronic chr2:23995778(-) A-I      intronic chr2:24103381(-) A-I      intronic chr2:23995777(-) A-I      intronic chr2:23997513(-) A-I      intronic chr2:24074118(-) A-I      intronic chr2:24135664(-) A-I      intronic chr2:24002184(-) A-I      intronic chr2:24002318(-) A-I      intronic chr2:24078591(-) A-I      intronic chr2:24094863(-) A-I      intronic chr2:24004343(-) A-I      intronic chr2:24004318(-) A-I      intronic chr2:24086104(-) A-I      intronic chr2:23998899(-) A-I      intronic chr2:24086119(-) A-I      intronic chr2:23992827(-) A-I      intronic chr2:24004491(-) A-I      intronic chr2:24081468(-) A-I      intronic chr2:24098894(-) A-I      intronic chr2:24082242(-) A-I      intronic chr2:24093285(-) A-I      intronic chr2:24064042(-) A-I      intronic chr2:24116632(-) A-I      intronic chr2:24053055(-) A-I      intronic chr2:24132912(-) A-I      intronic chr2:24057720(-) A-I      intronic chr2:24002317(-) A-I      intronic chr2:24070667(-) A-I      intronic chr2:24053126(-) A-I      intronic chr2:24015751(-) A-I      intronic chr2:23998152(-) A-I      intronic chr2:24068479(-) A-I      intronic chr2:24133638(-) A-I      intronic chr2:24002944(-) A-I      intronic chr2:24074188(-) A-I      intronic chr2:23996358(-) A-I      intronic chr2:24002994(-) A-I      intronic chr2:24121001(-) A-I      intronic chr2:24064636(-) A-I      intronic chr2:24015611(-) A-I      intronic chr2:24071155(-) A-I      intronic chr2:24068497(-) A-I      intronic chr2:24105489(-) A-I      intronic chr2:24133221(-) A-I      intronic chr2:24082720(-) A-I      intronic chr2:24129135(-) A-I      intronic chr2:24093332(-) A-I      intronic chr2:24081579(-) A-I      intronic chr2:24121045(-) A-I      intronic chr2:24132853(-) A-I      intronic chr2:24116618(-) A-I      intronic chr2:24004860(-) A-I      intronic chr2:24015789(-) A-I      intronic chr2:24100192(-) A-I      intronic chr2:23997080(-) A-I      intronic chr2:24133553(-) A-I      intronic chr2:24132971(-) A-I      intronic chr2:23995772(-) A-I      intronic chr2:24004548(-) A-I      intronic chr2:24071264(-) A-I      intronic chr2:24086177(-) A-I      intronic chr2:24002142(-) A-I      intronic chr2:23995776(-) A-I      intronic chr2:24072554(-) A-I      intronic chr2:24122553(-) A-I      intronic chr2:23993164(-) A-I      intronic chr2:24004472(-) A-I      intronic chr2:24117251(-) A-I      intronic chr2:24098900(-) A-I      intronic chr2:24068578(-) A-I      intronic chr2:23995673(-) A-I      intronic chr2:24122585(-) A-I      intronic chr2:24093335(-) A-I      intronic chr2:24004868(-) A-I      intronic chr2:24133116(-) A-I      intronic chr2:24068618(-) A-I      intronic chr2:24068632(-) A-I      intronic chr2:23998195(-) A-I      intronic chr2:24015044(-) A-I      intronic chr2:24094859(-) A-I      intronic chr2:24015786(-) A-I      intronic chr2:24072950(-) A-I      intronic chr2:24068547(-) A-I      intronic chr2:24117268(-) A-I      intronic chr2:24135714(-) A-I      intronic chr2:24116602(-) A-I      intronic chr2:24004960(-) A-I      intronic chr2:24133533(-) A-I      intronic chr2:24003056(-) A-I      intronic chr2:24105990(-) A-I      intronic chr2:24076912(-) A-I      intronic chr2:24105204(-) A-I      intronic chr2:23992653(-) A-I      intronic chr2:24068614(-) A-I      intronic chr2:24102773(-) A-I      intronic chr2:24058562(-) A-I      intronic chr2:24015665(-) A-I      intronic chr2:24106088(-) A-I      intronic chr2:24070780(-) A-I      intronic chr2:24004387(-) A-I      intronic chr2:24105157(-) A-I      intronic chr2:24004863(-) A-I      intronic chr2:24082773(-) A-I      intronic chr2:24057282(-) A-I      intronic chr2:24100320(-) A-I      intronic chr2:24071356(-) A-I      intronic chr2:23992187(-) A-I      intronic chr2:24002990(-) A-I      intronic chr2:24071267(-) A-I      intronic chr2:24078643(-) A-I      intronic chr2:24075194(-) A-I      intronic chr2:24122871(-) A-I      intronic chr2:24017088(-) A-I      intronic chr2:24053140(-) A-I      intronic chr2:24003035(-) A-I      intronic chr2:24074267(-) A-I      intronic chr2:23997225(-) A-I      intronic chr2:24004862(-) A-I      intronic chr2:24067091(-) A-I      intronic chr2:23993077(-) A-I      intronic chr2:24002186(-) A-I      intronic chr2:24133173(-) A-I      intronic chr2:23997289(-) A-I      intronic chr2:24138594(-) A-I      intronic chr2:24122070(-) A-I      intronic chr2:24070763(-) A-I      intronic chr2:24134180(-) A-I      intronic chr2:24093398(-) A-I      intronic chr2:24105991(-) A-I      intronic chr2:24004811(-) A-I      intronic chr2:24093254(-) A-I      intronic chr2:24074300(-) A-I      intronic chr2:24099134(-) A-I      intronic chr2:24112241(-) A-I      intronic chr2:24004853(-) A-I      intronic chr2:24004407(-) A-I      intronic chr2:24070849(-) A-I      intronic chr2:24106067(-) A-I      intronic chr2:24133187(-) A-I      intronic chr2:24099257(-) A-I      intronic chr2:24052580(-) A-I      intronic chr2:24105269(-) A-I      intronic chr2:24110189(-) A-I      intronic chr2:24057064(-) A-I      intronic chr2:24015639(-) A-I      intronic chr2:24112311(-) A-I      intronic chr2:24132984(-) A-I      intronic chr2:24112310(-) A-I      intronic chr2:24119938(-) A-I      intronic chr2:24122050(-) A-I      intronic chr2:23996285(-) A-I      intronic chr2:24064559(-) A-I      intronic chr2:24138733(-) A-I      intronic chr2:24004827(-) A-I      intronic chr2:24099309(-) A-I      intronic chr2:24108979(-) A-I      intronic chr2:24080793(-) A-I      intronic chr2:24098936(-) A-I      intronic chr2:24002932(-) A-I      intronic chr2:24057726(-) A-I      intronic chr2:23993074(-) A-I      intronic chr2:24004852(-) A-I      intronic chr2:24078676(-) A-I      intronic chr2:24122731(-) A-I      intronic chr2:24004914(-) A-I      intronic chr2:24015052(-) A-I      intronic chr2:23995775(-) A-I      intronic chr2:24067086(-) A-I      intronic chr2:24052424(-) A-I      intronic chr2:24080791(-) A-I      intronic chr2:24004452(-) A-I      intronic chr2:23998300(-) A-I      intronic chr2:24057304(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ATAD2B	chr2:24004821(-) A-I intron -    22327324 chr2:24004827(-) A-I intron -    22327324 chr2:23995803(-) A-I intron -    21960545 chr2:24002994(-) A-I intron -    21960545 chr2:24003035(-) A-I intron -    21960545 chr2:24017566(-) A-I intron -    21960545 chr2:24057304(-) A-I intron -    21960545 chr2:24064341(-) A-I intron -    21960545 chr2:24071356(-) A-I intron -    21960545 chr2:24084866(-) A-I intron -    21960545 chr2:24064785(-) A-G intron -    22484847 chr2:23992653(-) A-G intron -    22484847 chr2:23992671(-) A-G intron -    22484847 chr2:23992827(-) A-G intron -    22484847 chr2:23993142(-) A-G intron -    22484847 chr2:23993164(-) A-G intron -    22484847 chr2:23995673(-) A-G intron -    22484847 chr2:23995674(-) A-G intron -    22484847 chr2:23995772(-) A-G intron -    22484847 chr2:23995775(-) A-G intron -    22484847 chr2:23995776(-) A-G intron -    22484847 chr2:23995777(-) A-G intron -    22484847 chr2:23995778(-) A-G intron -    22484847 chr2:23995790(-) A-G intron -    22484847 chr2:23995862(-) A-G intron -    22484847 chr2:23995879(-) A-G intron -    22484847 chr2:23996141(-) A-G intron -    22484847 chr2:23996220(-) A-G intron -    22484847 chr2:23996285(-) A-G intron -    22484847 chr2:23996289(-) A-G intron -    22484847 chr2:23996358(-) A-G intron -    22484847 chr2:23997230(-) A-G intron -    22484847 chr2:23998195(-) A-G intron -    22484847 chr2:23998300(-) A-G intron -    22484847 chr2:24002186(-) A-G intron -    22484847 chr2:24002222(-) A-G intron -    22484847 chr2:24002932(-) A-G intron -    22484847 chr2:24002994(-) A-G intron -    22484847 chr2:24003041(-) G-A intron -    22484847 chr2:24004355(-) A-G intron -    22484847 chr2:24004387(-) A-G intron -    22484847 chr2:24004407(-) A-G intron -    22484847 chr2:24004452(-) A-G intron -    22484847 chr2:24004491(-) A-G intron -    22484847 chr2:24004821(-) A-G intron -    22484847 chr2:24004827(-) A-G intron -    22484847 chr2:24004854(-) A-G intron -    22484847 chr2:24015025(-) A-G intron -    22484847 chr2:24015097(-) A-G intron -    22484847 chr2:24015101(-) A-G intron -    22484847 chr2:24015112(-) A-G intron -    22484847 chr2:24015113(-) A-G intron -    22484847 chr2:24015212(-) A-G intron -    22484847 chr2:24015611(-) A-G intron -    22484847 chr2:24015639(-) A-G intron -    22484847 chr2:24015643(-) A-G intron -    22484847 chr2:24015665(-) A-G intron -    22484847 chr2:24015710(-) A-G intron -    22484847 chr2:24015751(-) A-G intron -    22484847 chr2:24015786(-) A-G intron -    22484847 chr2:24015787(-) A-G intron -    22484847 chr2:24015789(-) A-G intron -    22484847 chr2:24018641(-) G-A intron -    22484847 chr2:24027990(-) T-C intron -    22484847 chr2:24033883(-) T-G intron -    22484847 chr2:24052424(-) A-G intron -    22484847 chr2:24052449(-) A-G intron -    22484847 chr2:24052542(-) A-G intron -    22484847 chr2:24052569(-) A-G intron -    22484847 chr2:24052952(-) A-G intron -    22484847 chr2:24053055(-) A-G intron -    22484847 chr2:24053118(-) A-G intron -    22484847 chr2:24053126(-) A-G intron -    22484847 chr2:24053140(-) A-G intron -    22484847 chr2:24057170(-) A-G intron -    22484847 chr2:24057688(-) A-G intron -    22484847 chr2:24057693(-) A-G intron -    22484847 chr2:24057720(-) A-G intron -    22484847 chr2:24057726(-) A-G intron -    22484847 chr2:24058563(-) A-G intron -    22484847 chr2:24058571(-) A-G intron -    22484847 chr2:24058576(-) A-G intron -    22484847 chr2:24058589(-) A-G intron -    22484847 chr2:24058799(-) A-G intron -    22484847 chr2:24063874(-) A-G intron -    22484847 chr2:24064483(-) A-G intron -    22484847 chr2:24067061(-) G-A intron -    22484847 chr2:24068547(-) A-G intron -    22484847 chr2:24068604(-) A-G intron -    22484847 chr2:24068614(-) A-G intron -    22484847 chr2:24068632(-) A-G intron -    22484847 chr2:24068649(-) A-G intron -    22484847 chr2:24068696(-) A-G intron -    22484847 chr2:24070667(-) A-G intron -    22484847 chr2:24070670(-) A-G intron -    22484847 chr2:24070763(-) A-G intron -    22484847 chr2:24070780(-) A-G intron -    22484847 chr2:24070788(-) T-C intron -    22484847 chr2:24070849(-) A-G intron -    22484847 chr2:24071128(-) A-G intron -    22484847 chr2:24071155(-) A-G intron -    22484847 chr2:24071264(-) A-G intron -    22484847 chr2:24071267(-) A-G intron -    22484847 chr2:24071268(-) A-G intron -    22484847 chr2:24071287(-) A-G intron -    22484847 chr2:24071288(-) A-G intron -    22484847 chr2:24071336(-) A-G intron -    22484847 chr2:24071356(-) A-G intron -    22484847 chr2:24072511(-) A-G intron -    22484847 chr2:24072554(-) A-G intron -    22484847 chr2:24072615(-) A-G intron -    22484847 chr2:24072683(-) A-G intron -    22484847 chr2:24074118(-) A-G intron -    22484847 chr2:24074178(-) A-G intron -    22484847 chr2:24074188(-) A-G intron -    22484847 chr2:24074243(-) A-G intron -    22484847 chr2:24074290(-) A-G intron -    22484847 chr2:24074300(-) A-G intron -    22484847 chr2:24075194(-) A-G intron -    22484847 chr2:24080744(-) A-G intron -    22484847 chr2:24081117(-) T-G intron -    22484847 chr2:24082242(-) A-G intron -    22484847 chr2:24082720(-) A-G intron -    22484847 chr2:24082773(-) A-G intron -    22484847 chr2:24086010(-) A-G intron -    22484847 chr2:24086052(-) A-G intron -    22484847 chr2:24086104(-) A-G intron -    22484847 chr2:24086119(-) A-G intron -    22484847 chr2:24086138(-) A-G intron -    22484847 chr2:24086177(-) A-G intron -    22484847 chr2:24093254(-) A-G intron -    22484847 chr2:24098385(-) T-C intron -    22484847 chr2:24098386(-) C-A intron -    22484847 chr2:24098387(-) A-T intron -    22484847 chr2:24098931(-) A-G intron -    22484847 chr2:24098936(-) A-G intron -    22484847 chr2:24099134(-) A-G intron -    22484847 chr2:24099257(-) A-G intron -    22484847 chr2:24099309(-) A-G intron -    22484847 chr2:24100648(-) A-G intron -    22484847 chr2:24102773(-) A-G intron -    22484847 chr2:24102787(-) T-A intron -    22484847 chr2:24102794(-) A-C intron -    22484847 chr2:24104740(-) A-G intron -    22484847 chr2:24106088(-) A-G intron -    22484847 chr2:24112111(-) A-G intron -    22484847 chr2:24112175(-) A-G intron -    22484847 chr2:24112241(-) A-G intron -    22484847 chr2:24112242(-) A-G intron -    22484847 chr2:24112310(-) A-G intron -    22484847 chr2:24112311(-) A-G intron -    22484847 chr2:24112895(-) A-G intron -    22484847 chr2:24116733(-) A-G intron -    22484847 chr2:24117251(-) A-G intron -    22484847 chr2:24119888(-) A-G intron -    22484847 chr2:24119938(-) A-G intron -    22484847 chr2:24120900(-) A-G intron -    22484847 chr2:24120953(-) A-G intron -    22484847 chr2:24121001(-) A-G intron -    22484847 chr2:24121021(-) A-G intron -    22484847 chr2:24121026(-) A-G intron -    22484847 chr2:24121045(-) A-G intron -    22484847 chr2:24121955(-) A-G intron -    22484847 chr2:24122011(-) A-G intron -    22484847 chr2:24122050(-) A-G intron -    22484847 chr2:24122070(-) A-G intron -    22484847 chr2:24122553(-) A-G intron -    22484847 chr2:24122575(-) A-G intron -    22484847 chr2:24122585(-) A-G intron -    22484847 chr2:24122599(-) A-G intron -    22484847 chr2:24122731(-) A-G intron -    22484847 chr2:24129135(-) A-G intron -    22484847 chr2:24132849(-) A-G intron -    22484847 chr2:24132853(-) A-G intron -    22484847 chr2:24132871(-) A-G intron -    22484847 chr2:24132912(-) A-G intron -    22484847 chr2:24132971(-) A-G intron -    22484847 chr2:24133173(-) A-G intron -    22484847 chr2:24133187(-) A-G intron -    22484847 chr2:24133221(-) A-G intron -    22484847 chr2:24133533(-) A-G intron -    22484847 chr2:24133535(-) A-G intron -    22484847 chr2:24133638(-) A-G intron -    22484847 chr2:24133675(-) A-G intron -    22484847 chr2:24133681(-) A-G intron -    22484847 chr2:24134180(-) A-G intron -    22484847 chr2:24134181(-) A-G intron -    22484847 chr2:24134600(-) A-G intron -    22484847 chr2:24135261(-) A-G intron -    22484847 chr2:24138594(-) A-G intron -    22484847 chr2:24138600(-) A-G intron -    22484847 chr2:24138733(-) A-G intron -    22484847 chr2:24143993(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATAD2B	chr2:23972120-23972121(-) m6A 3'UTR       27773535 chr2:23972148-23972149(-) m6A 3'UTR       27773535 chr2:23972218-23972219(-) m6A 3'UTR       27773535 chr2:23974053-23974054(-) m6A 3'UTR       27773535 chr2:23974060-23974061(-) m6A 3'UTR       27773535 chr2:23974105-23974106(-) m6A 3'UTR       27773535 chr2:23974173-23974174(-) m6A 3'UTR       27773535 chr2:23974226-23974227(-) m6A 3'UTR       27773535 chr2:23974362-23974363(-) m6A 3'UTR       24981863//27773535 chr2:23974392-23974393(-) m6A 3'UTR       24981863//27773535 chr2:23974440-23974441(-) m6A 3'UTR       24981863//27773535 chr2:23974446-23974447(-) m6A 3'UTR       24981863//27773535 chr2:23974521-23974522(-) m6A 3'UTR       24981863//27773535//22608085 chr2:23974560-23974561(-) m6A 3'UTR       24284625//24981863//27773535//27371828//22608085 chr2:23974570-23974571(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr2:23974578-23974579(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr2:23974598-23974599(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr2:23974643-23974644(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr2:23974708-23974709(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:23974717-23974718(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:23974722-23974723(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:23974727-23974728(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:23974745-23974746(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:23974914-23974915(-) m6A 3'UTR//exon       24284625 chr2:23974926-23974927(-) m6A CDS//exon       24284625 chr2:23974944-23974945(-) m6A CDS//exon       24284625 chr2:23980300-23980301(-) m6A CDS//exon       27773535//22608085 chr2:23980333-23980334(-) m6A CDS//exon       27773535//22608085 chr2:23980372-23980373(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr2:23980407-23980408(-) m6A CDS//exon       24284625//27773535//22608085 chr2:23980414-23980415(-) m6A CDS//exon       24284625//27773535//22608085 chr2:23980430-23980431(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr2:23980450-23980451(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr2:23980584-23980585(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:23980599-23980600(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:23980610-23980611(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr2:23980676-23980677(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:23980718-23980719(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:23980724-23980725(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr2:23980766-23980767(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:23980773-23980774(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:23980841-23980842(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:23980853-23980854(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:23980862-23980863(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:23980877-23980878(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:23980880-23980881(-) m1A CDS//exon       26863196 chr2:23985127-23985128(-) m6A CDS//exon       24981863//27773535//22608085 chr2:23985156-23985157(-) m6A CDS//exon       24981863//27773535 chr2:23985162-23985163(-) m6A CDS//exon       24981863//27773535 chr2:23985196-23985197(-) m6A CDS//exon       24981863//27773535 chr2:23988412-23988413(-) m6A CDS//exon       27773535 chr2:23988461-23988462(-) m6A CDS//exon       27773535 chr2:24090786-24090787(-) m6A CDS       27773535 chr2:24090801-24090802(-) m6A CDS       27773535 chr2:24098746-24098747(-) m6A CDS       24981863//27773535//22608085 chr2:24103538-24103539(-) m6A CDS       24981863//27773535//22608085 chr2:24103548-24103549(-) m6A CDS       24981863//27773535//22608085 chr2:24103563-24103564(-) m6A CDS       24981863//27773535//22608085 chr2:24106499-24106500(-) m6A CDS//intron       24981863//27773535//22608085 chr2:24107639-24107640(-) m1A CDS       26863196 chr2:24107738-24107739(-) m6A CDS       24981863 chr2:24108610-24108611(-) m6A CDS       24981863 chr2:24108669-24108670(-) m6A CDS       24981863 chr2:24149498-24149499(-) m6A CDS       27773536 chr2:24149513-24149514(-) m6A CDS       27773536 chr2:24149632-24149633(-) m6A CDS       27773536 chr2:24149642-24149643(-) m6A 5'UTR       27773536 chr2:24149661-24149662(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ATAD2B	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-11-3p
Interactor2: ATAD2B

Evidence Support:

Weak-Evidence	Microarray
Support Database	ViRBase

References:

PMID	22174674	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	EA.hy926 cells	Interactor2 expression	Downregulation
Description	As KSHV putative direct targets we extracted transcripts that were significantly down-regulated significantly in the replicate experiments, and which contained at least one seed-match to one of the KSHV miRNAs. We identified 704 putative direct targets in DG-75 cells (Figure 3B), and 980 putative direct targets in EA.hy926 cells (Figure 3C). A complete list of putative direct targets can be found in Dataset S2 for DG-75 cells and in Dataset S3 for EA.hy926 cells. The overlap between the two datasets contained 153 putative direct targets (Dataset S4).