Basic Information:

  VIRBase ID:  

VHID00429615

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-11-3p:  MIMAT0002181          RGS19:  NM_005873     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-11-3p	RGS19
miRBase Accession/Entrez ID	MIMAT0002181	10287
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GAIP//RGSGAIP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RGS19	chr20:62707529(-) A-I      intronic chr20:62707429(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RGS19	chr20:62704639-62704640(-) m6A 3'UTR       24981863//27773535//22608085 chr20:62704647-62704648(-) m6A 3'UTR       24981863//27773535//22608085 chr20:62704654-62704655(-) m6A 3'UTR       24981863//27773535//22608085 chr20:62704682-62704683(-) m6A 3'UTR       27773535 chr20:62704712-62704713(-) m6A 3'UTR       24284625//27773535 chr20:62704724-62704725(-) m6A 3'UTR       24284625//27773535 chr20:62704732-62704733(-) m6A 3'UTR       24284625//27773535 chr20:62704739-62704740(-) m6A 3'UTR       24284625//27773535 chr20:62704774-62704775(-) m6A 3'UTR       24284625 chr20:62704808-62704809(-) m6A 3'UTR       24284625 chr20:62704813-62704814(-) m6A 3'UTR       24284625 chr20:62704831-62704832(-) m6A 3'UTR       24284625 chr20:62704881-62704882(-) m6A 3'UTR       24284625 chr20:62705018-62705019(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536 chr20:62705072-62705073(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536 chr20:62705185-62705186(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773536 chr20:62705287-62705288(-) m6A CDS       24284625 chr20:62705386-62705387(-) m6A CDS       - chr20:62705524-62705525(-) m6A CDS       - chr20:62705611-62705612(-) m6A CDS       - chr20:62705630-62705631(-) m6A CDS       - chr20:62705891-62705892(-) m6A CDS//exon       24284625 chr20:62707976-62707977(-) m6A CDS//exon       24284625 chr20:62710690-62710691(-) m6A 5'UTR//exon//intron       27773536 chr20:62710959-62710960(-) m6A exon//intron       27773536 chr20:62711086-62711087(-) m6A exon//intron       27773536 chr20:62711119-62711120(-) m6A exon//intron       27773536 chr20:62711125-62711126(-) m6A exon//intron       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RGS19	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-11-3p
Interactor2: RGS19

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg