Detail Information

Basic Information:


  VIRBase ID:  

VHID00428700

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-11-3p:           HSP90AA1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-11-3p HSP90AA1
miRBase
Accession/Entrez ID
MIMAT0002181 3320
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - EL52//HEL-S-65p//Hsp103//HSP86//Hsp89//HSP89A//Hsp90//HSP90A//HSP90N//HSPC1//HSPCA//HSPCAL1//HSPCAL4//HSPN//LAP-2//LAP2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR HSP90AA1
chr14:102551172(-) A-I      NonSyn:Lys->Arg
chr14:102551175(-) A-I      NonSyn:Lys->Arg
chr14:102551176(-) A-I      NonSyn:Lys->Glu
chr14:102600285(-) A-I      intronic
chr14:102559309(-) A-I      intronic
chr14:102559349(-) A-I      intronic
chr14:102600322(-) A-I      intronic
chr14:102559250(-) A-I      intronic
chr14:102572977(-) A-I      intronic
chr14:102559286(-) A-I      intronic
chr14:102559199(-) A-I      intronic
chr14:102604097(-) A-I      intronic
chr14:102572996(-) A-I      intronic
chr14:102559338(-) A-I      intronic
chr14:102559295(-) A-I      intronic
chr14:102573009(-) A-I      intronic
chr14:102580486(-) A-I      intronic
chr14:102600305(-) A-I      intronic
chr14:102604109(-) A-I      intronic
chr14:102573002(-) A-I      intronic
chr14:102581593(-) A-I      intronic
chr14:102586450(-) A-I      intronic
chr14:102590211(-) A-I      intronic
chr14:102580455(-) A-I      intronic
chr14:102556883(-) A-I      intronic
chr14:102595570(-) A-I      intronic
chr14:102591534(-) A-I      intronic
chr14:102581595(-) A-I      intronic
chr14:102600599(-) A-I      intronic
chr14:102581607(-) A-I      intronic
chr14:102604305(-) A-I      intronic
chr14:102599091(-) A-I      intronic
chr14:102581627(-) A-I      intronic
chr14:102596017(-) A-I      intronic
chr14:102604270(-) A-I      intronic
chr14:102587117(-) A-I      intronic
chr14:102596019(-) A-I      intronic
chr14:102604208(-) A-I      intronic
chr14:102559328(-) A-I      intronic
chr14:102604189(-) A-I      intronic
chr14:102595559(-) A-I      intronic
chr14:102569176(-) A-I      intronic
chr14:102599178(-) A-I      intronic
chr14:102604124(-) A-I      intronic
chr14:102581630(-) A-I      intronic
chr14:102603933(-) A-I      intronic
chr14:102603832(-) A-I      intronic
chr14:102582032(-) A-I      intronic
chr14:102599154(-) A-I      intronic
chr14:102582036(-) A-I      intronic
chr14:102598871(-) A-I      intronic
chr14:102603784(-) A-I      intronic
chr14:102564711(-) A-I      intronic
chr14:102585385(-) A-I      intronic
chr14:102585386(-) A-I      intronic
chr14:102603778(-) A-I      intronic
chr14:102585391(-) A-I      intronic
chr14:102585409(-) A-I      intronic
chr14:102585958(-) A-I      intronic
chr14:102586566(-) A-I      intronic
chr14:102569350(-) A-I      intronic
chr14:102587405(-) A-I      intronic
chr14:102587496(-) A-I      intronic
chr14:102589118(-) A-I      intronic
chr14:102594259(-) A-I      intronic
chr14:102603416(-) A-I      intronic
chr14:102603411(-) A-I      intronic
chr14:102603388(-) A-I      intronic
chr14:102603371(-) A-I      intronic
chr14:102589520(-) A-I      intronic
chr14:102589539(-) A-I      intronic
chr14:102603359(-) A-I      intronic
chr14:102591469(-) A-I      intronic
chr14:102591603(-) A-I      intronic
chr14:102603300(-) A-I      intronic
chr14:102566376(-) A-I      intronic
chr14:102595978(-) A-I      intronic
chr14:102594081(-) A-I      intronic
chr14:102600531(-) A-I      intronic
chr14:102600527(-) A-I      intronic
chr14:102600366(-) A-I      intronic
chr14:102600340(-) A-I      intronic
chr14:102564925(-) A-I      intronic
chr14:102600057(-) A-I      intronic
chr14:102594584(-) A-I      intronic
chr14:102600047(-) A-I      intronic
chr14:102600027(-) A-I      intronic
chr14:102600021(-) A-I      intronic
chr14:102599923(-) A-I      intronic
chr14:102595017(-) A-I      intronic
chr14:102604269(-) A-I      intronic
chr14:102572241(-) A-I      intronic
chr14:102599918(-) A-I      intronic
chr14:102595027(-) A-I      intronic
chr14:102599251(-) A-I      intronic
chr14:102595869(-) A-I      intronic
chr14:102595870(-) A-I      intronic
chr14:102578647(-) A-I      intronic
chr14:102595984(-) A-I      intronic
chr14:102599234(-) A-I      intronic
chr14:102600092(-) A-I      intronic
chr14:102599210(-) A-I      intronic
chr14:102600526(-) A-I      intronic
chr14:102593026(-) A-I      intronic
chr14:102587263(-) A-I      intronic
chr14:102596436(-) A-I      intronic
chr14:102597005(-) A-I      intronic
chr14:102599185(-) A-I      intronic
chr14:102599078(-) A-I      intronic
chr14:102566351(-) A-I      intronic
chr14:102597283(-) A-I      intronic
chr14:102598431(-) A-I      intronic
chr14:102598762(-) A-I      intronic
chr14:102594572(-) A-I      intronic
chr14:102599053(-) A-I      intronic
chr14:102591539(-) A-I      intronic
chr14:102599039(-) A-I      intronic
chr14:102595137(-) A-I      intronic
chr14:102564994(-) A-I      intronic
chr14:102599066(-) A-I      intronic
chr14:102597102(-) A-I      intronic
chr14:102585937(-) A-I      intronic
chr14:102579890(-) A-I      intronic
chr14:102599469(-) A-I      intronic
chr14:102559300(-) A-I      intronic
chr14:102566894(-) A-I      intronic
chr14:102603385(-) A-I      intronic
chr14:102598660(-) A-I      intronic
chr14:102581553(-) A-I      intronic
chr14:102603889(-) A-I      intronic
chr14:102560248(-) A-I      intronic
chr14:102582386(-) A-I      intronic
chr14:102558680(-) A-I      intronic
chr14:102602661(-) A-I      intronic
chr14:102604160(-) A-I      intronic
chr14:102559252(-) A-I      intronic
chr14:102559253(-) A-I      intronic
chr14:102604230(-) A-I      intronic
chr14:102599959(-) A-I      intronic
chr14:102559285(-) A-I      intronic
chr14:102582076(-) A-I      intronic
chr14:102559319(-) A-I      intronic
chr14:102596050(-) A-I      intronic
chr14:102559678(-) A-I      intronic
chr14:102563417(-) A-I      intronic
chr14:102563501(-) A-I      intronic
chr14:102563502(-) A-I      intronic
chr14:102564692(-) A-I      intronic
chr14:102603698(-) A-I      intronic
chr14:102564726(-) A-I      intronic
chr14:102595136(-) A-I      intronic
chr14:102582417(-) A-I      intronic
chr14:102564731(-) A-I      intronic
chr14:102564732(-) A-I      intronic
chr14:102598840(-) A-I      intronic
chr14:102569718(-) A-I      intronic
chr14:102564739(-) A-I      intronic
chr14:102564903(-) A-I      intronic
chr14:102603842(-) A-I      intronic
chr14:102567004(-) A-I      intronic
chr14:102569259(-) A-I      intronic
chr14:102569272(-) A-I      intronic
chr14:102585470(-) A-I      intronic
chr14:102570055(-) A-I      intronic
chr14:102570058(-) A-I      intronic
chr14:102570065(-) A-I      intronic
chr14:102570254(-) A-I      intronic
chr14:102586584(-) A-I      intronic
chr14:102570258(-) A-I      intronic
chr14:102570829(-) A-I      intronic
chr14:102581154(-) A-I      intronic
chr14:102571339(-) A-I      intronic
chr14:102572235(-) A-I      intronic
chr14:102603429(-) A-I      intronic
chr14:102559275(-) A-I      intronic
chr14:102573059(-) A-I      intronic
chr14:102573060(-) A-I      intronic
chr14:102573063(-) A-I      intronic
chr14:102566478(-) A-I      intronic
chr14:102573069(-) A-I      intronic
chr14:102573777(-) A-I      intronic
chr14:102573935(-) A-I      intronic
chr14:102574472(-) A-I      intronic
chr14:102582427(-) A-I      intronic
chr14:102587108(-) A-I      intronic
chr14:102574517(-) A-I      intronic
chr14:102604252(-) A-I      intronic
chr14:102595968(-) A-I      intronic
chr14:102574635(-) A-I      intronic
chr14:102576504(-) A-I      intronic
chr14:102574946(-) A-I      intronic
chr14:102581504(-) A-I      intronic
chr14:102594646(-) A-I      intronic
chr14:102588756(-) A-I      intronic
chr14:102589723(-) A-I      intronic
chr14:102570186(-) A-I      intronic
chr14:102581524(-) A-I      intronic
chr14:102599849(-) A-I      intronic
chr14:102571421(-) A-I      intronic
chr14:102570356(-) A-I      intronic
chr14:102573790(-) A-I      intronic
chr14:102598885(-) A-I      intronic
chr14:102565004(-) A-I      intronic
chr14:102565639(-) A-I      intronic
chr14:102563596(-) A-I      intronic
chr14:102566473(-) A-I      intronic
chr14:102566403(-) A-I      intronic
chr14:102585330(-) A-I      intronic
chr14:102566270(-) A-I      intronic
chr14:102586444(-) A-I      intronic
chr14:102592959(-) A-I      intronic
chr14:102569406(-) A-I      intronic
chr14:102566306(-) A-I      intronic
chr14:102567035(-) A-I      intronic
chr14:102581585(-) A-I      intronic
chr14:102566408(-) A-I      intronic
chr14:102598808(-) A-I      intronic
chr14:102569692(-) A-I      intronic
chr14:102581945(-) A-I      intronic
chr14:102570219(-) A-I      intronic
chr14:102559746(-) A-I      intronic
chr14:102597121(-) A-I      intronic
chr14:102565032(-) A-I      intronic
chr14:102596007(-) A-I      intronic
chr14:102597281(-) A-I      intronic
chr14:102559247(-) A-I      intronic
chr14:102570340(-) A-I      intronic
chr14:102593000(-) A-I      intronic
chr14:102570233(-) A-I      intronic
chr14:102588893(-) A-I      intronic
chr14:102566790(-) A-I      intronic
chr14:102585320(-) A-I      intronic
chr14:102596113(-) A-I      intronic
chr14:102566479(-) A-I      intronic
chr14:102599468(-) A-I      intronic
chr14:102594926(-) A-I      intronic
chr14:102580212(-) A-I      intronic
chr14:102569705(-) A-I      intronic
chr14:102594844(-) A-I      intronic
chr14:102587468(-) A-I      intronic
chr14:102564676(-) A-I      intronic
chr14:102559683(-) A-I      intronic
chr14:102569396(-) A-I      intronic
chr14:102557715(-) A-I      intronic
chr14:102590002(-) A-I      intronic
chr14:102594184(-) A-I      intronic
chr14:102597275(-) A-I      intronic
chr14:102559264(-) A-I      intronic
chr14:102579418(-) A-I      intronic
chr14:102566357(-) A-I      intronic
chr14:102566267(-) A-I      intronic
chr14:102566298(-) A-I      intronic
chr14:102589575(-) A-I      intronic
chr14:102559259(-) A-I      intronic
chr14:102571346(-) A-I      intronic
chr14:102559216(-) A-I      intronic
chr14:102573800(-) A-I      intronic
chr14:102603403(-) A-I      intronic
chr14:102574345(-) A-I      intronic
chr14:102569319(-) A-I      intronic
chr14:102564637(-) A-I      intronic
chr14:102587432(-) A-I      intronic
chr14:102599454(-) A-I      intronic
chr14:102559260(-) A-I      intronic
chr14:102560211(-) A-I      intronic
chr14:102597159(-) A-I      intronic
chr14:102602712(-) A-I      intronic
chr14:102581171(-) A-I      intronic
chr14:102573123(-) A-I      intronic
chr14:102559203(-) A-I      intronic
chr14:102585374(-) A-I      intronic
chr14:102565856(-) A-I      intronic
chr14:102560264(-) A-I      intronic
chr14:102594230(-) A-I      intronic
chr14:102572327(-) A-I      intronic
chr14:102595977(-) A-I      intronic
chr14:102559261(-) A-I      intronic
chr14:102564681(-) A-I      intronic
chr14:102581972(-) A-I      intronic
chr14:102574524(-) A-I      intronic
chr14:102602784(-) A-I      intronic
chr14:102580491(-) A-I      intronic
chr14:102587467(-) A-I      intronic
chr14:102581963(-) A-I      intronic
chr14:102559173(-) A-I      intronic
chr14:102579856(-) A-I      intronic
chr14:102563602(-) A-I      intronic
chr14:102574556(-) A-I      intronic
chr14:102598609(-) A-I      intronic
chr14:102597100(-) A-I      intronic
chr14:102602736(-) A-I      intronic
chr14:102592990(-) A-I      intronic
chr14:102603738(-) A-I      intronic
chr14:102581620(-) A-I      intronic
chr14:102564965(-) A-I      intronic
chr14:102595119(-) A-I      intronic
chr14:102565812(-) A-I      intronic
chr14:102582134(-) A-I      intronic
chr14:102574082(-) A-I      intronic
chr14:102584857(-) A-I      intronic
chr14:102595086(-) A-I      intronic
chr14:102600624(-) A-I      intronic
chr14:102600593(-) A-I      intronic
chr14:102579855(-) A-I      intronic
chr14:102565893(-) A-I      intronic
chr14:102559202(-) A-I      intronic
chr14:102585922(-) A-I      intronic
chr14:102557316(-) A-I      intronic
chr14:102566375(-) A-I      intronic
chr14:102565002(-) A-I      intronic
chr14:102595121(-) A-I      intronic
chr14:102596472(-) A-I      intronic
chr14:102582049(-) A-I      intronic
chr14:102566503(-) A-I      intronic
chr14:102557716(-) A-I      intronic
chr14:102558159(-) A-I      intronic
chr14:102600474(-) A-I      intronic
chr14:102586665(-) A-I      intronic
chr14:102581304(-) A-I      intronic
chr14:102564929(-) A-I      intronic
chr14:102594663(-) A-I      intronic
chr14:102596004(-) A-I      intronic
chr14:102597378(-) A-I      intronic
chr14:102604091(-) A-I      intronic
chr14:102560228(-) A-I      intronic
chr14:102589611(-) A-I      intronic
chr14:102604186(-) A-I      intronic
chr14:102603526(-) A-I      intronic
chr14:102573075(-) A-I      intronic
chr14:102574561(-) A-I      intronic
chr14:102559258(-) A-I      intronic
chr14:102565704(-) A-I      intronic
chr14:102599175(-) A-I      intronic
chr14:102600563(-) A-I      intronic
chr14:102559355(-) A-I      intronic
chr14:102558503(-) A-I      intronic
chr14:102589621(-) A-I      intronic
chr14:102574491(-) A-I      intronic
chr14:102586574(-) A-I      intronic
chr14:102558066(-) A-I      intronic
chr14:102581359(-) A-I      intronic
chr14:102559220(-) A-I      intronic
chr14:102564939(-) A-I      intronic
chr14:102590406(-) A-I      intronic
chr14:102603841(-) A-I      intronic
chr14:102588797(-) A-I      intronic
chr14:102574940(-) A-I      intronic
chr14:102564980(-) A-I      intronic
chr14:102600586(-) A-I      intronic
chr14:102589585(-) A-I      intronic
chr14:102585941(-) A-I      intronic
chr14:102588762(-) A-I      intronic
chr14:102582385(-) A-I      intronic
chr14:102566830(-) A-I      intronic
chr14:102569853(-) A-I      intronic
chr14:102581985(-) A-I      intronic
chr14:102596578(-) A-I      intronic
chr14:102572244(-) A-I      intronic
chr14:102560229(-) A-I      intronic
chr14:102603800(-) A-I      intronic
chr14:102558654(-) A-I      intronic
chr14:102596046(-) A-I      intronic
chr14:102603833(-) A-I      intronic
chr14:102594882(-) A-I      intronic
chr14:102560163(-) A-I      intronic
chr14:102604128(-) A-I      intronic
chr14:102603773(-) A-I      intronic
chr14:102565819(-) A-I      intronic
chr14:102590276(-) A-I      intronic
chr14:102603186(-) A-I      intronic
chr14:102600658(-) A-I      intronic
chr14:102570684(-) A-I      intronic
chr14:102599495(-) A-I      intronic
chr14:102560118(-) A-I      intronic
chr14:102558534(-) A-I      intronic
chr14:102573100(-) A-I      intronic
chr14:102595075(-) A-I      intronic
chr14:102553021(-) A-I      intronic
chr14:102558601(-) A-I      intronic
chr14:102580630(-) A-I      intronic
chr14:102595648(-) A-I      intronic
chr14:102578778(-) A-I      intronic
chr14:102571433(-) A-I      intronic
chr14:102598848(-) A-I      intronic
chr14:102574343(-) A-I      intronic
chr14:102559212(-) A-I      intronic
chr14:102594659(-) A-I      intronic
chr14:102557322(-) A-I      intronic
chr14:102565733(-) A-I      intronic
chr14:102580478(-) A-I      intronic
chr14:102573818(-) A-I      intronic
chr14:102584809(-) A-I      intronic
chr14:102563505(-) A-I      intronic
chr14:102573084(-) A-I      intronic
chr14:102597328(-) A-I      intronic
chr14:102559185(-) A-I      intronic
chr14:102569435(-) A-I      intronic
chr14:102591371(-) A-I      intronic
chr14:102560147(-) A-I      intronic
chr14:102564866(-) A-I      intronic
chr14:102578757(-) A-I      intronic
chr14:102603534(-) A-I      intronic
chr14:102603939(-) A-I      intronic
chr14:102558577(-) A-I      intronic
chr14:102599958(-) A-I      intronic
chr14:102598363(-) A-I      intronic
chr14:102585294(-) A-I      intronic
chr14:102595052(-) A-I      intronic
chr14:102564979(-) A-I      intronic
chr14:102559301(-) A-I      intronic
chr14:102600270(-) A-I      intronic
chr14:102558182(-) A-I      intronic
chr14:102566900(-) A-I      intronic
chr14:102576785(-) A-I      intronic
chr14:102584853(-) A-I      intronic
chr14:102581307(-) A-I      intronic
chr14:102594569(-) A-I      intronic
chr14:102570662(-) A-I      intronic
chr14:102586619(-) A-I      intronic
chr14:102570363(-) A-I      intronic
chr14:102603141(-) A-I      intronic
chr14:102590825(-) A-I      intronic
chr14:102556967(-) A-I      intronic
chr14:102603475(-) A-I      intronic
chr14:102594570(-) A-I      intronic
chr14:102588746(-) A-I      intronic
chr14:102582486(-) A-I      intronic
chr14:102572313(-) A-I      intronic
chr14:102578936(-) A-I      intronic
chr14:102587229(-) A-I      intronic
chr14:102566339(-) A-I      intronic
chr14:102589487(-) A-I      intronic
chr14:102571462(-) A-I      intronic
chr14:102597145(-) A-I      intronic
chr14:102589563(-) A-I      intronic
chr14:102585289(-) A-I      intronic
chr14:102566901(-) A-I      intronic
chr14:102589972(-) A-I      intronic
chr14:102569645(-) A-I      intronic
chr14:102596526(-) A-I      intronic
chr14:102575053(-) A-I      intronic
chr14:102564639(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED HSP90AA1
chr14:102570219(-) A-I intron -    15545495
chr14:102570233(-) A-I intron -    15545495
chr14:102570340(-) A-I intron -    15545495
chr14:102570356(-) A-I intron -    15545495
chr14:102570363(-) A-I intron -    15545495
chr14:102565002(-) A-G intron -    22484847
chr14:102574946(-) A-G intron -    22484847
chr14:102597275(-) A-G intron -    22484847
chr14:102603842(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase HSP90AA1
chr14:102547462-102547463(-) m6A 3'UTR       27773535//22575960
chr14:102547585-102547586(-) m6A 3'UTR       22575960
chr14:102547644-102547645(-) m6A 3'UTR       22575960
chr14:102547729-102547730(-) m6A 3'UTR       22575960
chr14:102548052-102548053(-) m6A CDS       26404942
chr14:102548457-102548458(-) m6A CDS       22575960
chr14:102548489-102548490(-) m6A CDS       22575960
chr14:102548531-102548532(-) m6A CDS       27371828//22575960
chr14:102548603-102548604(-) m6A CDS       24981863//27371828//22575960
chr14:102548626-102548627(-) m6A CDS       24284625//24981863//27371828//22575960
chr14:102548640-102548641(-) m6A CDS       24284625//24981863//27371828//22575960
chr14:102548674-102548675(-) m6A CDS       24284625//24981863//28052920//27371828//22575960
chr14:102548710-102548711(-) m6A CDS       24284625//24981863//28052920//27371828//22575960
chr14:102548717-102548718(-) m6A CDS       24284625//24981863//28052920//27371828//22575960
chr14:102548767-102548768(-) m6A CDS       24284625//24981863//28052920//27371828//22575960
chr14:102549053-102549054(-) m6A 3'UTR//intron       24284625//24981863//27371828//22575960
chr14:102549119-102549120(-) m6A 3'UTR//intron       24284625//27371828
chr14:102549395-102549396(-) m6A 3'UTR//CDS       24981863//27773535//27371828//22575960
chr14:102549416-102549417(-) m6A 3'UTR//CDS       24981863//27773535//27371828//22575960
chr14:102549429-102549430(-) m6A 3'UTR//CDS       24981863//27773535//27371828//22575960
chr14:102549475-102549476(-) m6A 3'UTR//CDS       24981863//27773535//27371828//22575960
chr14:102549507-102549508(-) m6A 3'UTR//CDS       24981863//27773535//27371828//22575960
chr14:102549586-102549587(-) m6A 3'UTR//CDS       27773535//27371828//22575960
chr14:102549626-102549627(-) m6A 3'UTR//CDS       22575960
chr14:102549633-102549634(-) m6A 3'UTR//CDS       22575960
chr14:102549873-102549874(-) m6A exon//intron       22575960
chr14:102549901-102549902(-) m6A 3'UTR//CDS//exon       22575960
chr14:102549908-102549909(-) m6A 3'UTR//CDS//exon       22575960
chr14:102549932-102549933(-) m6A 3'UTR//CDS//exon       22575960
chr14:102550013-102550014(-) m6A 3'UTR//CDS//exon       22575960
chr14:102550136-102550137(-) m6A 3'UTR//CDS//exon       22575960
chr14:102550169-102550170(-) m6A 3'UTR//CDS//exon       22575960
chr14:102550189-102550190(-) m6A 3'UTR//CDS//exon       22575960
chr14:102550201-102550202(-) m6A 3'UTR//CDS//exon       22575960
chr14:102550277-102550278(-) m6A 3'UTR//CDS//exon       27773535//22575960
chr14:102550298-102550299(-) m6A 3'UTR//CDS//exon       27773535//22575960
chr14:102550319-102550320(-) m6A 3'UTR//CDS//exon       27773535//22575960
chr14:102550433-102550434(-) m6A exon//intron       27773535
chr14:102550806-102550807(-) m6A 3'UTR//CDS//exon       27773535
chr14:102550821-102550822(-) m6A 3'UTR//CDS//exon       27773535
chr14:102550883-102550884(-) m6A 3'UTR//CDS//exon       27773535
chr14:102551106-102551107(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr14:102551121-102551122(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr14:102551163-102551164(-) m1A 3'UTR//CDS       26863196
chr14:102551172-102551173(-) m1A 3'UTR//CDS       26863196
chr14:102551198-102551199(-) m1A 3'UTR//CDS       26863196
chr14:102551237-102551238(-) m6A 3'UTR//CDS       25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:102551270-102551271(-) m1A 3'UTR//CDS       26863196
chr14:102551279-102551280(-) m6A 3'UTR//CDS       25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr14:102551291-102551292(-) Am 3'UTR//CDS       -
chr14:102551670-102551671(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535//27371828//22575960//22608085
chr14:102551714-102551715(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828//22575960//22608085
chr14:102551719-102551720(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828//22575960//22608085
chr14:102551747-102551748(-) m6A CDS//exon       24981863//27773535//27371828//22575960//22608085
chr14:102551763-102551764(-) m6A CDS//exon       24981863//27773535//27371828//22575960//22608085
chr14:102551846-102551847(-) m6A exon//intron       24981863//27773535//27371828//22575960
chr14:102551860-102551861(-) m6A exon//intron       27773535//27371828//22575960
chr14:102551976-102551977(-) m6A exon//intron       24981863
chr14:102552030-102552031(-) m6A exon//intron       24981863//27773535
chr14:102552103-102552104(-) m6A CDS//intron       24981863//27773535
chr14:102552164-102552165(-) m6A CDS//intron       24981863//27773535
chr14:102552280-102552281(-) m6A 3'UTR//CDS//exon//intron       24981863//26404942
chr14:102552361-102552362(-) m6A 3'UTR//CDS//exon//intron       24284625//24981863//26404942//27773535//22575960
chr14:102552375-102552376(-) m6A 3'UTR//CDS//exon//intron       24284625//24981863//26404942//27773535//22575960
chr14:102552411-102552412(-) m6A 3'UTR//CDS//exon//intron       24284625//24981863//26404942//27773535//27371828//22575960
chr14:102552453-102552454(-) m6A 3'UTR//CDS//exon//intron       24284625//24981863//27773535//27371828
chr14:102552507-102552508(-) m6A exon//intron       24284625//27773535//27371828
chr14:102552596-102552597(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr14:102552689-102552690(-) m6A CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr14:102552696-102552697(-) m6A CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr14:102552702-102552703(-) m6A CDS//exon       24284625//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr14:102605679-102605680(-) m6A CDS       25456834//27371828//27773536
chr14:102605685-102605686(-) m6A CDS       25456834//27371828//27773536
chr14:102605822-102605823(-) m6A 5'UTR       27371828//27773536
chr14:102605874-102605875(-) m6A 5'UTR       27371828//27773536
chr14:102605909-102605910(-) m6A 5'UTR       27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate HSP90AA1
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Cytosolic polysome Human T lymphocytes (Jurkat E6-1)     12923260
ER-bound polysome Human T lymphocytes (Jurkat E6-1)     12923260
Exosome Blood     -
Membrane-bound ribosome Human T lymphocytes (Jurkat E6-1)     12923260
Membrane-bound ribosome Cell line (HeLa)     18192611
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Perinuclear Human embryonic kidney cell line (HEK-293)     12923260

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-11-3p
Interactor2: HSP90AA1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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