Basic Information:

  VIRBase ID:  

VHID00427918

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6055

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10b:  MIMAT0002180          ZNF714:  NR_117086     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10b	ZNF714
miRBase Accession/Entrez ID	MIMAT0002180	148206
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF714	chr19:21301140(+) A-I      3'UTR chr19:21282043(+) A-I      intronic chr19:21282731(+) A-I      intronic chr19:21282779(+) A-I      intronic chr19:21302010(+) A-I      3'UTR chr19:21302029(+) A-I      3'UTR chr19:21301176(+) A-I      3'UTR chr19:21283597(+) A-I      intronic chr19:21283603(+) A-I      intronic chr19:21286252(+) A-I      intronic chr19:21289215(+) A-I      intronic chr19:21301144(+) A-I      3'UTR chr19:21302053(+) A-I      3'UTR chr19:21289751(+) A-I      intronic chr19:21301135(+) A-I      Syn:Stp->Stp chr19:21289790(+) A-I      intronic chr19:21289816(+) A-I      intronic chr19:21303000(+) A-I      3'UTR chr19:21303006(+) A-I      3'UTR chr19:21301969(+) A-I      3'UTR chr19:21301958(+) A-I      3'UTR chr19:21301996(+) A-I      3'UTR chr19:21292056(+) A-I      intronic chr19:21290847(+) A-I      intronic chr19:21286181(+) A-I      intronic chr19:21286182(+) A-I      intronic chr19:21303042(+) A-I      3'UTR chr19:21303086(+) A-I      3'UTR chr19:21286198(+) A-I      intronic chr19:21305257(+) A-I      3'UTR chr19:21305314(+) A-I      3'UTR chr19:21290810(+) A-I      intronic chr19:21289883(+) A-I      intronic chr19:21305320(+) A-I      3'UTR chr19:21305799(+) A-I      3'UTR chr19:21297011(+) A-I      intronic chr19:21302030(+) A-I      3'UTR chr19:21301124(+) A-I      NonSyn:Arg->Gly chr19:21305816(+) A-I      3'UTR chr19:21305842(+) A-I      3'UTR chr19:21297006(+) A-I      intronic chr19:21286173(+) A-I      intronic chr19:21296981(+) A-I      intronic chr19:21288716(+) A-I      intronic chr19:21296998(+) A-I      intronic chr19:21288702(+) A-I      intronic chr19:21286149(+) A-I      intronic chr19:21288889(+) A-I      intronic chr19:21297199(+) A-I      intronic chr19:21297187(+) A-I      intronic chr19:21297172(+) A-I      intronic chr19:21297162(+) A-I      intronic chr19:21297082(+) A-I      intronic chr19:21286291(+) A-I      intronic chr19:21296454(+) A-I      intronic chr19:21296430(+) A-I      intronic chr19:21292236(+) A-I      intronic chr19:21288646(+) A-I      intronic chr19:21290930(+) A-I      intronic chr19:21290871(+) A-I      intronic chr19:21287618(+) A-I      intronic chr19:21289040(+) A-I      intronic chr19:21289813(+) A-I      intronic chr19:21290859(+) A-I      intronic chr19:21290804(+) A-I      intronic chr19:21290800(+) A-I      intronic chr19:21290102(+) A-I      intronic chr19:21286197(+) A-I      intronic chr19:21287655(+) A-I      intronic chr19:21286341(+) A-I      intronic chr19:21288958(+) A-I      intronic chr19:21288963(+) A-I      intronic chr19:21289874(+) A-I      intronic chr19:21297080(+) A-I      intronic chr19:21287522(+) A-I      intronic chr19:21288972(+) A-I      intronic chr19:21287548(+) A-I      intronic chr19:21286482(+) A-I      intronic chr19:21287593(+) A-I      intronic chr19:21287606(+) A-I      intronic chr19:21290992(+) A-I      intronic chr19:21286485(+) A-I      intronic chr19:21288088(+) A-I      intronic chr19:21287458(+) A-I      intronic chr19:21287475(+) A-I      intronic chr19:21288506(+) A-I      intronic chr19:21287499(+) A-I      intronic chr19:21288541(+) A-I      intronic chr19:21288546(+) A-I      intronic chr19:21283075(+) A-I      intronic chr19:21288551(+) A-I      intronic chr19:21288565(+) A-I      intronic chr19:21288582(+) A-I      intronic chr19:21288601(+) A-I      intronic chr19:21288682(+) A-I      intronic chr19:21288689(+) A-I      intronic chr19:21282788(+) A-I      intronic chr19:21282817(+) A-I      intronic chr19:21282859(+) A-I      intronic chr19:21283789(+) A-I      intronic chr19:21283739(+) A-I      intronic chr19:21288807(+) A-I      intronic chr19:21297067(+) A-I      intronic chr19:21286304(+) A-I      intronic chr19:21283119(+) A-I      intronic chr19:21283145(+) A-I      intronic chr19:21283618(+) A-I      intronic chr19:21283700(+) A-I      intronic chr19:21301204(+) A-I      3'UTR chr19:21301944(+) A-I      3'UTR chr19:21307783(+) A-I      3'UTR chr19:21302925(+) A-I      3'UTR chr19:21302898(+) A-I      3'UTR chr19:21302101(+) A-I      3'UTR chr19:21302019(+) A-I      3'UTR chr19:21302007(+) A-I      3'UTR chr19:21306262(+) A-I      3'UTR chr19:21304114(+) A-I      3'UTR chr19:21301076(+) A-I      NonSyn:Lys->Glu chr19:21305768(+) A-I      3'UTR chr19:21301032(+) A-I      NonSyn:Gln->Arg chr19:21304056(+) A-I      3'UTR chr19:21304001(+) A-I      3'UTR chr19:21301024(+) A-I      Syn:Leu->Leu chr19:21305898(+) A-I      3'UTR chr19:21305730(+) A-I      3'UTR chr19:21305377(+) A-I      3'UTR chr19:21304000(+) A-I      3'UTR chr19:21303939(+) A-I      3'UTR chr19:21305235(+) A-I      3'UTR chr19:21303921(+) A-I      3'UTR chr19:21305757(+) A-I      3'UTR chr19:21305759(+) A-I      3'UTR chr19:21303065(+) A-I      3'UTR chr19:21303028(+) A-I      3'UTR chr19:21301961(+) A-I      3'UTR chr19:21304135(+) A-I      3'UTR chr19:21305748(+) A-I      3'UTR chr19:21306213(+) A-I      3'UTR chr19:21286609(+) A-I      intronic chr19:21290149(+) A-I      intronic chr19:21288110(+) A-I      intronic chr19:21290966(+) A-I      intronic chr19:21286212(+) A-I      intronic chr19:21287520(+) A-I      intronic chr19:21288746(+) A-I      intronic chr19:21288583(+) A-I      intronic chr19:21277542(+) A-I      intronic chr19:21287930(+) A-I      intronic chr19:21288489(+) A-I      intronic chr19:21286278(+) A-I      intronic chr19:21287584(+) A-I      intronic chr19:21297121(+) A-I      intronic chr19:21289254(+) A-I      intronic chr19:21290099(+) A-I      intronic chr19:21287599(+) A-I      intronic chr19:21290829(+) A-I      intronic chr19:21289665(+) A-I      intronic chr19:21282101(+) A-I      intronic chr19:21296479(+) A-I      intronic chr19:21288599(+) A-I      intronic chr19:21290783(+) A-I      intronic chr19:21287649(+) A-I      intronic chr19:21288848(+) A-I      intronic chr19:21295841(+) A-I      intronic chr19:21286641(+) A-I      intronic chr19:21286105(+) A-I      intronic chr19:21289798(+) A-I      intronic chr19:21286374(+) A-I      intronic chr19:21290934(+) A-I      intronic chr19:21288950(+) A-I      intronic chr19:21286183(+) A-I      intronic chr19:21287452(+) A-I      intronic chr19:21306287(+) A-I      3'UTR chr19:21303066(+) A-I      3'UTR chr19:21302997(+) A-I      3'UTR chr19:21290830(+) A-I      intronic chr19:21302111(+) A-I      3'UTR chr19:21303067(+) A-I      3'UTR chr19:21290762(+) A-I      intronic chr19:21282726(+) A-I      intronic chr19:21305305(+) A-I      3'UTR chr19:21303082(+) A-I      3'UTR chr19:21305210(+) A-I      3'UTR chr19:21288596(+) A-I      intronic chr19:21304123(+) A-I      3'UTR chr19:21302035(+) A-I      3'UTR chr19:21305780(+) A-I      3'UTR chr19:21305301(+) A-I      3'UTR chr19:21307811(+) A-I      3'UTR chr19:21302864(+) A-I      3'UTR chr19:21287912(+) A-I      intronic chr19:21305869(+) A-I      3'UTR chr19:21303974(+) A-I      3'UTR chr19:21307798(+) A-I      3'UTR chr19:21305680(+) A-I      3'UTR chr19:21306175(+) A-I      3'UTR chr19:21290754(+) A-I      intronic chr19:21302117(+) A-I      3'UTR chr19:21305729(+) A-I      3'UTR chr19:21305771(+) A-I      3'UTR chr19:21306340(+) A-I      3'UTR chr19:21303884(+) A-I      3'UTR chr19:21305702(+) A-I      3'UTR chr19:21305708(+) A-I      3'UTR chr19:21303025(+) A-I      3'UTR chr19:21305380(+) A-I      3'UTR chr19:21303860(+) A-I      3'UTR chr19:21303017(+) A-I      3'UTR chr19:21305191(+) A-I      3'UTR chr19:21305333(+) A-I      3'UTR chr19:21305943(+) A-I      3'UTR chr19:21305703(+) A-I      3'UTR chr19:21303915(+) A-I      3'UTR chr19:21304121(+) A-I      3'UTR chr19:21305846(+) A-I      3'UTR chr19:21306161(+) A-I      3'UTR chr19:21286248(+) A-I      intronic chr19:21302005(+) A-I      3'UTR chr19:21305782(+) A-I      3'UTR chr19:21303964(+) A-I      3'UTR chr19:21304097(+) A-I      3'UTR chr19:21305205(+) A-I      3'UTR chr19:21305262(+) A-I      3'UTR chr19:21304019(+) A-I      3'UTR chr19:21303010(+) A-I      3'UTR chr19:21302022(+) A-I      3'UTR chr19:21301953(+) A-I      3'UTR chr19:21290965(+) A-I      intronic chr19:21302046(+) A-I      3'UTR chr19:21304141(+) A-I      3'UTR chr19:21302994(+) A-I      3'UTR chr19:21302944(+) A-I      3'UTR chr19:21305837(+) A-I      3'UTR chr19:21302085(+) A-I      3'UTR chr19:21305853(+) A-I      3'UTR chr19:21305397(+) A-I      3'UTR chr19:21282685(+) A-I      intronic chr19:21306155(+) A-I      3'UTR chr19:21297076(+) A-I      intronic chr19:21287602(+) A-I      intronic chr19:21305781(+) A-I      3'UTR chr19:21286438(+) A-I      intronic chr19:21303090(+) A-I      3'UTR chr19:21305863(+) A-I      3'UTR chr19:21287558(+) A-I      intronic chr19:21290950(+) A-I      intronic chr19:21302945(+) A-I      3'UTR chr19:21306238(+) A-I      3'UTR chr19:21303952(+) A-I      3'UTR chr19:21296989(+) A-I      intronic chr19:21287605(+) A-I      intronic chr19:21288940(+) A-I      intronic chr19:21301952(+) A-I      3'UTR chr19:21290855(+) A-I      intronic chr19:21305717(+) A-I      3'UTR chr19:21305260(+) A-I      3'UTR chr19:21302099(+) A-I      3'UTR chr19:21302126(+) A-I      3'UTR chr19:21305694(+) A-I      3'UTR chr19:21304065(+) A-I      3'UTR chr19:21305259(+) A-I      3'UTR chr19:21303899(+) A-I      3'UTR chr19:21304041(+) A-I      3'UTR chr19:21289043(+) A-I      intronic chr19:21296584(+) A-I      intronic chr19:21292080(+) A-I      intronic chr19:21305927(+) A-I      3'UTR chr19:21288483(+) A-I      intronic chr19:21283068(+) A-I      intronic chr19:21305263(+) A-I      3'UTR chr19:21302094(+) A-I      3'UTR chr19:21305297(+) A-I      3'UTR chr19:21306275(+) A-I      3'UTR chr19:21303125(+) A-I      3'UTR chr19:21288842(+) A-I      intronic chr19:21304016(+) A-I      3'UTR chr19:21302866(+) A-I      3'UTR chr19:21283706(+) A-I      intronic chr19:21306297(+) A-I      3'UTR chr19:21307790(+) A-I      3'UTR chr19:21305944(+) A-I      3'UTR chr19:21302090(+) A-I      3'UTR chr19:21301930(+) A-I      3'UTR chr19:21305266(+) A-I      3'UTR chr19:21296995(+) A-I      intronic chr19:21303961(+) A-I      3'UTR chr19:21302028(+) A-I      3'UTR chr19:21305292(+) A-I      3'UTR chr19:21286568(+) A-I      intronic chr19:21305878(+) A-I      3'UTR chr19:21302045(+) A-I      3'UTR chr19:21288878(+) A-I      intronic chr19:21302895(+) A-I      3'UTR chr19:21305772(+) A-I      3'UTR chr19:21283066(+) A-I      intronic chr19:21287931(+) A-I      intronic chr19:21302986(+) A-I      3'UTR chr19:21296496(+) A-I      intronic chr19:21289121(+) A-I      intronic chr19:21287523(+) A-I      intronic chr19:21303037(+) A-I      3'UTR chr19:21302020(+) A-I      3'UTR chr19:21286615(+) A-I      intronic chr19:21303960(+) A-I      3'UTR chr19:21292099(+) A-I      intronic chr19:21305711(+) A-I      3'UTR chr19:21302949(+) A-I      3'UTR chr19:21305836(+) A-I      3'UTR chr19:21302163(+) A-I      3'UTR chr19:21302974(+) A-I      3'UTR chr19:21282007(+) A-I      intronic chr19:21266022(+) A-I      intronic chr19:21306211(+) A-I      3'UTR chr19:21290596(+) A-I      intronic chr19:21304010(+) A-I      3'UTR chr19:21307807(+) A-I      3'UTR chr19:21286314(+) A-I      intronic chr19:21302050(+) A-I      3'UTR chr19:21305937(+) A-I      3'UTR chr19:21303984(+) A-I      3'UTR chr19:21283573(+) A-I      intronic chr19:21296501(+) A-I      intronic chr19:21286651(+) A-I      intronic chr19:21283153(+) A-I      intronic chr19:21297079(+) A-I      intronic chr19:21283586(+) A-I      intronic chr19:21295832(+) A-I      intronic chr19:21296490(+) A-I      intronic chr19:21296406(+) A-I      intronic chr19:21286688(+) A-I      intronic chr19:21289758(+) A-I      intronic chr19:21282169(+) A-I      intronic chr19:21290543(+) A-I      intronic chr19:21301979(+) A-I      NonSyn:Arg->Gly chr19:21301104(+) A-I      NonSyn:Lys->Arg chr19:21301975(+) A-I      Syn:Gln->Gln

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF714	chr19:21302986(+) A-I exon 3'UTR    15342557 chr19:21302994(+) A-I exon 3'UTR    15342557 chr19:21302997(+) A-I exon 3'UTR    15342557 chr19:21303010(+) A-I exon 3'UTR    15342557   //22327324 chr19:21303017(+) A-I exon 3'UTR    15342557   //22327324 chr19:21303860(+) A-I exon 3'UTR    15342557 chr19:21303899(+) A-I exon 3'UTR    15342557 chr19:21303909(+) A-I exon 3'UTR    15342557 chr19:21303960(+) A-I exon 3'UTR    15342557 chr19:21303961(+) A-I exon 3'UTR    15342557 chr19:21303964(+) A-I exon 3'UTR    15342557 chr19:21303968(+) A-I exon 3'UTR    15342557 chr19:21303974(+) A-I exon 3'UTR    15342557 chr19:21303984(+) A-I exon 3'UTR    15342557 chr19:21304016(+) A-I exon 3'UTR    15342557 chr19:21304019(+) A-I exon 3'UTR    15342557 chr19:21304033(+) A-I exon 3'UTR    15342557 chr19:21304041(+) A-I exon 3'UTR    15342557 chr19:21304121(+) A-I exon 3'UTR    15342557 chr19:21304122(+) A-I exon 3'UTR    15342557 chr19:21304123(+) A-I exon 3'UTR    15342557 chr19:21305191(+) A-I exon 3'UTR    15342557   //22327324 chr19:21305259(+) A-I exon 3'UTR    15342557 chr19:21305260(+) A-I exon 3'UTR    15342557 chr19:21305262(+) A-I exon 3'UTR    15342557 chr19:21305266(+) A-I exon 3'UTR    15342557 chr19:21305286(+) A-I exon 3'UTR    15342557 chr19:21305292(+) A-I exon 3'UTR    15342557 chr19:21305301(+) A-I exon 3'UTR    15342557 chr19:21305305(+) A-I exon 3'UTR    15342557 chr19:21305318(+) A-I exon 3'UTR    15342557 chr19:21305337(+) A-I exon 3'UTR    15342557 chr19:21305669(+) A-I exon 3'UTR    15342557 chr19:21305702(+) A-I exon 3'UTR    15342557 chr19:21305703(+) A-I exon 3'UTR    15342557 chr19:21305717(+) A-I exon 3'UTR    15342557 chr19:21305729(+) A-I exon 3'UTR    15342557 chr19:21305771(+) A-I exon 3'UTR    15342557 chr19:21305772(+) A-I exon 3'UTR    15342557 chr19:21305780(+) A-I exon 3'UTR    15342557 chr19:21305781(+) A-I exon 3'UTR    15342557 chr19:21305782(+) A-I exon 3'UTR    15342557 chr19:21305836(+) A-I exon 3'UTR    15342557 chr19:21305837(+) A-I exon 3'UTR    15342557 chr19:21305853(+) A-I exon 3'UTR    15342557 chr19:21305863(+) A-I exon 3'UTR    15342557 chr19:21305869(+) A-I exon 3'UTR    15342557 chr19:21305878(+) A-I exon 3'UTR    15342557 chr19:21305882(+) A-I exon 3'UTR    15342557 chr19:21305889(+) A-I exon 3'UTR    15342557 chr19:21305902(+) A-I exon 3'UTR    15342557 chr19:21305909(+) A-I exon 3'UTR    15342557 chr19:21305927(+) A-I exon 3'UTR    15342557 chr19:21305937(+) A-I exon 3'UTR    15342557 chr19:21305944(+) A-I exon 3'UTR    15342557 chr19:21306142(+) A-I exon 3'UTR    15258596 chr19:21306175(+) A-I exon 3'UTR    15258596 chr19:21306206(+) A-I exon 3'UTR    15258596 chr19:21306211(+) A-I exon 3'UTR    15258596 chr19:21306287(+) A-I exon 3'UTR    15258596 chr19:21306334(+) A-I exon 3'UTR    15258596 chr19:21306343(+) A-I exon 3'UTR    15258596 chr19:21306365(+) A-I exon 3'UTR    15258596 chr19:21306380(+) A-I exon 3'UTR    15258596 chr19:21302035(+) A-I intron -    22327324 chr19:21302045(+) A-I intron -    22327324 chr19:21302099(+) A-I intron -    22327324 chr19:21302944(+) A-I intron -    22327324 chr19:21303034(+) A-I intron -    22327324 chr19:21303090(+) A-I intron -    22327324 chr19:21301950(+) A-G intron -    21725310   //22484847 chr19:21302099(+) A-G intron -    21725310   //22484847 chr19:21303017(+) A-G intron -    21725310   //22484847 chr19:21303968(+) A-G intron -    21725310   //22484847 chr19:21305717(+) A-G intron -    21725310 chr19:21306365(+) A-G intron -    21725310   //22484847 chr19:21272763(+) G-A intron -    22484847 chr19:21301093(+) A-G intron -    22484847 chr19:21301094(+) A-G intron -    22484847 chr19:21301975(+) A-G intron -    22484847 chr19:21302015(+) A-G intron -    22484847 chr19:21302020(+) A-G intron -    22484847 chr19:21302035(+) A-G intron -    22484847 chr19:21302045(+) A-G intron -    22484847 chr19:21302094(+) A-G intron -    22484847 chr19:21302098(+) A-G intron -    22484847 chr19:21302125(+) A-G intron -    22484847 chr19:21302126(+) A-G intron -    22484847 chr19:21302938(+) A-G intron -    22484847 chr19:21302944(+) A-G intron -    22484847 chr19:21302945(+) A-G intron -    22484847 chr19:21302962(+) A-G intron -    22484847 chr19:21303010(+) A-G intron -    22484847 chr19:21303025(+) A-G intron -    22484847 chr19:21303034(+) A-G intron -    22484847 chr19:21303090(+) A-G intron -    22484847 chr19:21303862(+) A-G intron -    22484847 chr19:21303974(+) A-G intron -    22484847 chr19:21305191(+) A-G intron -    22484847 chr19:21305266(+) A-G intron -    22484847 chr19:21305292(+) A-G intron -    22484847 chr19:21305301(+) A-G intron -    22484847 chr19:21305305(+) A-G intron -    22484847 chr19:21305694(+) A-G intron -    22484847 chr19:21305863(+) A-G intron -    22484847 chr19:21305882(+) A-G intron -    22484847 chr19:21305889(+) A-G intron -    22484847 chr19:21305909(+) A-G intron -    22484847 chr19:21306211(+) A-G intron -    22484847 chr19:21307795(+) A-G intron -    22484847 chr19:21307807(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF714	chr19:21281641-21281642(+) m6A CDS//intron       27773535 chr19:21299636-21299637(+) m6A 5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299654-21299655(+) m6A 5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299691-21299692(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299706-21299707(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299778-21299779(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299783-21299784(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299868-21299869(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299875-21299876(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299880-21299881(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21299895-21299896(+) m6A 3'UTR//5'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300036-21300037(+) m6A 3'UTR//CDS//intron       22608085 chr19:21300063-21300064(+) m6A 3'UTR//CDS//intron       22608085 chr19:21300147-21300148(+) m6A 3'UTR//CDS//intron       22608085 chr19:21300315-21300316(+) m6A 3'UTR//CDS//intron       27773535//22608085 chr19:21300372-21300373(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300414-21300415(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300456-21300457(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300483-21300484(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300567-21300568(+) m6A 3'UTR//CDS//intron       24284625//27773535//22608085 chr19:21300615-21300616(+) m6A 3'UTR//CDS//intron       24284625//27773535//22608085 chr19:21300651-21300652(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300698-21300699(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300708-21300709(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300735-21300736(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300782-21300783(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300819-21300820(+) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr19:21300866-21300867(+) m6A 3'UTR//CDS//intron       24284625//27773535//22608085 chr19:21300876-21300877(+) m6A 3'UTR//CDS//intron       24284625//27773535//22608085 chr19:21300960-21300961(+) m6A 3'UTR//CDS//intron       24981863//27773535//22608085 chr19:21301020-21301021(+) m6A 3'UTR//CDS//intron       24981863//22608085 chr19:21301055-21301056(+) m6A 3'UTR//CDS//intron       24284625//24981863//22608085 chr19:21301078-21301079(+) m6A 3'UTR//CDS//intron       24284625//24981863//22608085 chr19:21301175-21301176(+) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085 chr19:21301244-21301245(+) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085 chr19:21301297-21301298(+) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085 chr19:21301344-21301345(+) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//22608085 chr19:21301461-21301462(+) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr19:21301479-21301480(+) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr19:21301518-21301519(+) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr19:21301545-21301546(+) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr19:21301554-21301555(+) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr19:21301592-21301593(+) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr19:21301652-21301653(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr19:21301712-21301713(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr19:21301728-21301729(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr19:21301741-21301742(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr19:21301812-21301813(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr19:21301901-21301902(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr19:21302006-21302007(+) m6A 3'UTR//intron       24981863//22608085 chr19:21302029-21302030(+) m6A 3'UTR//intron       25456834//24981863//22608085 chr19:21302125-21302126(+) m6A 3'UTR//intron       25456834//24981863//22608085 chr19:21302187-21302188(+) m6A 3'UTR//intron       25456834//24981863//22608085 chr19:21302223-21302224(+) m6A 3'UTR//intron       25456834//24981863//27773535//22608085 chr19:21302316-21302317(+) m6A 3'UTR//intron       24981863//22608085 chr19:21302336-21302337(+) m6A 3'UTR//intron       24981863//22608085 chr19:21303031-21303032(+) m6A 3'UTR//intron       - chr19:21303066-21303067(+) m6A 3'UTR//intron       - chr19:21305128-21305129(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr19:21305141-21305142(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr19:21305149-21305150(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr19:21305220-21305221(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr19:21305234-21305235(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr19:21305253-21305254(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr19:21305332-21305333(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr19:21305401-21305402(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr19:21308000-21308001(+) m6A 3'UTR       25456834//24981863//22608085 chr19:21308043-21308044(+) m6A 3'UTR       25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF714	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10b
Interactor2: ZNF714

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	cRep//miRanda//PARalyzer//Rep//Targetscan
Support Database	RepTar//ViRBase//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	RepTar//ViRBase//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-3 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6B BC-3 derived 3'UTR clusters with seed matches to expressed miRNAs.