Basic Information:

  VIRBase ID:  

VHID00426159

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6061

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10b:  MIMAT0002180          PPP1R12B:  NM_001167857     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10b	PPP1R12B
miRBase Accession/Entrez ID	MIMAT0002180	4660
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MYPT2//PP1bp55

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PPP1R12B	chr1:202443511(+) A-I      intronic chr1:202512777(+) A-I      intronic chr1:202341449(+) A-I      intronic chr1:202341446(+) A-I      intronic chr1:202408413(+) A-I      intronic chr1:202408402(+) A-I      intronic chr1:202408400(+) A-I      intronic chr1:202408393(+) A-I      intronic chr1:202408389(+) A-I      intronic chr1:202554359(+) A-I      3'UTR chr1:202554312(+) A-I      3'UTR chr1:202554265(+) A-I      3'UTR chr1:202554260(+) A-I      3'UTR chr1:202554224(+) A-I      3'UTR chr1:202554168(+) A-I      3'UTR chr1:202551835(+) A-I      3'UTR chr1:202551834(+) A-I      3'UTR chr1:202319849(+) A-I      intronic chr1:202323593(+) A-I      intronic chr1:202323611(+) A-I      intronic chr1:202325224(+) A-I      intronic chr1:202443510(+) A-I      intronic chr1:202533018(+) A-I      intronic chr1:202533010(+) A-I      intronic chr1:202517867(+) A-I      intronic chr1:202517860(+) A-I      intronic chr1:202517834(+) A-I      intronic chr1:202517818(+) A-I      intronic chr1:202517810(+) A-I      intronic chr1:202455788(+) A-I      intronic chr1:202455774(+) A-I      intronic chr1:202455771(+) A-I      intronic chr1:202455762(+) A-I      intronic chr1:202455751(+) A-I      intronic chr1:202455749(+) A-I      intronic chr1:202455737(+) A-I      intronic chr1:202455732(+) A-I      intronic chr1:202455731(+) A-I      intronic chr1:202455224(+) A-I      intronic chr1:202455219(+) A-I      intronic chr1:202455210(+) A-I      intronic chr1:202455193(+) A-I      intronic chr1:202455176(+) A-I      intronic chr1:202364177(+) A-I      intronic chr1:202364112(+) A-I      intronic chr1:202364085(+) A-I      intronic chr1:202364084(+) A-I      intronic chr1:202364070(+) A-I      intronic chr1:202364069(+) A-I      intronic chr1:202351826(+) A-I      intronic chr1:202351819(+) A-I      intronic chr1:202351809(+) A-I      intronic chr1:202351804(+) A-I      intronic chr1:202351803(+) A-I      intronic chr1:202351795(+) A-I      intronic chr1:202341454(+) A-I      intronic chr1:202341453(+) A-I      intronic chr1:202341399(+) A-I      intronic chr1:202532447(+) A-I      intronic chr1:202551902(+) A-I      3'UTR chr1:202551866(+) A-I      3'UTR chr1:202551870(+) A-I      3'UTR chr1:202554189(+) A-I      3'UTR chr1:202355508(+) A-I      intronic chr1:202334480(+) A-I      intronic chr1:202363255(+) A-I      intronic chr1:202551968(+) A-I      3'UTR chr1:202355484(+) A-I      intronic chr1:202323517(+) A-I      intronic chr1:202323800(+) A-I      intronic chr1:202334463(+) A-I      intronic chr1:202507173(+) A-I      intronic chr1:202363682(+) A-I      intronic chr1:202551958(+) A-I      3'UTR chr1:202351883(+) A-I      intronic chr1:202460416(+) A-I      intronic chr1:202473339(+) A-I      intronic chr1:202473360(+) A-I      intronic chr1:202533153(+) A-I      intronic chr1:202473401(+) A-I      intronic chr1:202517508(+) A-I      intronic chr1:202362110(+) A-I      intronic chr1:202390647(+) A-I      intronic chr1:202323586(+) A-I      intronic chr1:202329769(+) A-I      intronic chr1:202342082(+) A-I      intronic chr1:202329717(+) A-I      intronic chr1:202364099(+) A-I      intronic chr1:202363788(+) A-I      intronic chr1:202363627(+) A-I      intronic chr1:202507261(+) A-I      intronic chr1:202551954(+) A-I      3'UTR chr1:202342081(+) A-I      intronic chr1:202507308(+) A-I      intronic chr1:202551882(+) A-I      3'UTR chr1:202473427(+) A-I      intronic chr1:202473433(+) A-I      intronic chr1:202363289(+) A-I      intronic chr1:202473442(+) A-I      intronic chr1:202512806(+) A-I      intronic chr1:202328443(+) A-I      intronic chr1:202328395(+) A-I      intronic chr1:202328376(+) A-I      intronic chr1:202415623(+) A-I      intronic chr1:202533000(+) A-I      intronic chr1:202323470(+) A-I      intronic chr1:202554297(+) A-I      3'UTR chr1:202554298(+) A-I      3'UTR chr1:202321904(+) A-I      intronic chr1:202473462(+) A-I      intronic chr1:202341577(+) A-I      intronic chr1:202321888(+) A-I      intronic chr1:202321862(+) A-I      intronic chr1:202517575(+) A-I      intronic chr1:202517804(+) A-I      intronic chr1:202517821(+) A-I      intronic chr1:202517840(+) A-I      intronic chr1:202341560(+) A-I      intronic chr1:202390250(+) A-I      intronic chr1:202341552(+) A-I      intronic chr1:202378511(+) A-I      intronic chr1:202532380(+) A-I      intronic chr1:202364124(+) A-I      intronic chr1:202473471(+) A-I      intronic chr1:202430222(+) A-I      intronic chr1:202438065(+) A-I      intronic chr1:202517858(+) A-I      intronic chr1:202325042(+) A-I      intronic chr1:202518647(+) A-I      intronic chr1:202532976(+) A-I      intronic chr1:202518714(+) A-I      intronic chr1:202445241(+) A-I      intronic chr1:202518728(+) A-I      intronic chr1:202341422(+) A-I      intronic chr1:202363628(+) A-I      intronic chr1:202341418(+) A-I      intronic chr1:202518731(+) A-I      intronic chr1:202445732(+) A-I      intronic chr1:202390317(+) A-I      intronic chr1:202445750(+) A-I      intronic chr1:202455678(+) A-I      intronic chr1:202455891(+) A-I      intronic chr1:202363649(+) A-I      intronic chr1:202551919(+) A-I      3'UTR chr1:202455679(+) A-I      intronic chr1:202532967(+) A-I      intronic chr1:202455695(+) A-I      intronic chr1:202339138(+) A-I      intronic chr1:202518753(+) A-I      intronic chr1:202551906(+) A-I      3'UTR chr1:202518782(+) A-I      intronic chr1:202339105(+) A-I      intronic chr1:202473268(+) A-I      intronic chr1:202551863(+) A-I      3'UTR chr1:202532442(+) A-I      intronic chr1:202532497(+) A-I      intronic chr1:202480444(+) A-I      intronic chr1:202362276(+) A-I      intronic chr1:202355625(+) A-I      intronic chr1:202362213(+) A-I      intronic chr1:202339065(+) A-I      intronic chr1:202357534(+) A-I      intronic chr1:202358873(+) A-I      intronic chr1:202358967(+) A-I      intronic chr1:202517574(+) A-I      intronic chr1:202360040(+) A-I      intronic chr1:202361714(+) A-I      intronic chr1:202517547(+) A-I      intronic chr1:202480445(+) A-I      intronic chr1:202473313(+) A-I      intronic chr1:202551789(+) A-I      3'UTR chr1:202339024(+) A-I      intronic chr1:202473294(+) A-I      intronic chr1:202473273(+) A-I      intronic chr1:202364134(+) A-I      intronic chr1:202551828(+) A-I      3'UTR chr1:202551854(+) A-I      3'UTR chr1:202339004(+) A-I      intronic chr1:202337989(+) A-I      intronic chr1:202390318(+) A-I      intronic chr1:202460402(+) A-I      intronic chr1:202551898(+) A-I      3'UTR chr1:202551856(+) A-I      3'UTR chr1:202493004(+) A-I      intronic chr1:202551862(+) A-I      3'UTR chr1:202551892(+) A-I      3'UTR chr1:202334958(+) A-I      intronic chr1:202334940(+) A-I      intronic chr1:202506402(+) A-I      intronic chr1:202532941(+) A-I      intronic chr1:202328298(+) A-I      intronic chr1:202457986(+) A-I      intronic chr1:202507385(+) A-I      intronic chr1:202517630(+) A-I      intronic chr1:202328398(+) A-I      intronic chr1:202334322(+) A-I      intronic chr1:202341564(+) A-I      intronic chr1:202515646(+) A-I      intronic chr1:202507178(+) A-I      intronic chr1:202551853(+) A-I      3'UTR chr1:202551836(+) A-I      3'UTR chr1:202363833(+) A-I      intronic chr1:202551811(+) A-I      3'UTR chr1:202533094(+) A-I      intronic chr1:202418521(+) A-I      intronic chr1:202358714(+) A-I      intronic chr1:202341474(+) A-I      intronic chr1:202390689(+) A-I      intronic chr1:202554257(+) A-I      3'UTR chr1:202360178(+) A-I      intronic chr1:202323568(+) A-I      intronic chr1:202324184(+) A-I      intronic chr1:202351821(+) A-I      intronic chr1:202532940(+) A-I      intronic chr1:202321836(+) A-I      intronic chr1:202512793(+) A-I      intronic chr1:202363294(+) A-I      intronic chr1:202554308(+) A-I      3'UTR chr1:202533012(+) A-I      intronic chr1:202473470(+) A-I      intronic chr1:202341715(+) A-I      intronic chr1:202322856(+) A-I      intronic chr1:202358825(+) A-I      intronic chr1:202364200(+) A-I      intronic chr1:202543636(+) A-I      intronic chr1:202328441(+) A-I      intronic chr1:202507218(+) A-I      intronic chr1:202517713(+) A-I      intronic chr1:202373891(+) A-I      intronic chr1:202341069(+) A-I      intronic chr1:202532293(+) A-I      intronic chr1:202456776(+) A-I      intronic chr1:202554237(+) A-I      3'UTR chr1:202328513(+) A-I      intronic chr1:202554285(+) A-I      3'UTR chr1:202330067(+) A-I      intronic chr1:202335392(+) A-I      intronic chr1:202458050(+) A-I      intronic chr1:202341525(+) A-I      intronic chr1:202532426(+) A-I      intronic chr1:202533151(+) A-I      intronic chr1:202390621(+) A-I      intronic chr1:202506289(+) A-I      intronic chr1:202342180(+) A-I      intronic chr1:202458024(+) A-I      intronic chr1:202373745(+) A-I      intronic chr1:202373757(+) A-I      intronic chr1:202363834(+) A-I      intronic chr1:202341620(+) A-I      intronic chr1:202533058(+) A-I      intronic chr1:202341542(+) A-I      intronic chr1:202335019(+) A-I      intronic chr1:202321837(+) A-I      intronic chr1:202342116(+) A-I      intronic chr1:202551851(+) A-I      3'UTR chr1:202418503(+) A-I      intronic chr1:202554218(+) A-I      3'UTR chr1:202390249(+) A-I      intronic chr1:202532466(+) A-I      intronic chr1:202551758(+) A-I      3'UTR chr1:202554334(+) A-I      3'UTR chr1:202364125(+) A-I      intronic chr1:202473500(+) A-I      intronic chr1:202473281(+) A-I      intronic chr1:202457985(+) A-I      intronic chr1:202339041(+) A-I      intronic chr1:202324120(+) A-I      intronic chr1:202473374(+) A-I      intronic chr1:202554385(+) A-I      3'UTR chr1:202337960(+) A-I      intronic chr1:202480414(+) A-I      intronic chr1:202422016(+) A-I      intronic chr1:202358944(+) A-I      intronic chr1:202328675(+) A-I      intronic chr1:202328756(+) A-I      intronic chr1:202339081(+) A-I      intronic chr1:202532270(+) A-I      intronic chr1:202480474(+) A-I      intronic chr1:202337972(+) A-I      intronic chr1:202443668(+) A-I      intronic chr1:202319910(+) A-I      intronic chr1:202480552(+) A-I      intronic chr1:202455875(+) A-I      intronic chr1:202455798(+) A-I      intronic chr1:202517589(+) A-I      intronic chr1:202335391(+) A-I      intronic chr1:202460292(+) A-I      intronic chr1:202357412(+) A-I      intronic chr1:202373728(+) A-I      intronic chr1:202554242(+) A-I      3'UTR chr1:202512607(+) A-I      intronic chr1:202368597(+) A-I      intronic chr1:202532330(+) A-I      intronic chr1:202342163(+) A-I      intronic chr1:202554211(+) A-I      3'UTR chr1:202351884(+) A-I      intronic chr1:202554156(+) A-I      3'UTR chr1:202473368(+) A-I      intronic chr1:202507165(+) A-I      intronic chr1:202334954(+) A-I      intronic chr1:202390563(+) A-I      intronic chr1:202533050(+) A-I      intronic chr1:202333629(+) A-I      intronic chr1:202554273(+) A-I      3'UTR chr1:202554194(+) A-I      3'UTR chr1:202373769(+) A-I      intronic chr1:202455742(+) A-I      intronic chr1:202330295(+) A-I      intronic chr1:202390496(+) A-I      intronic chr1:202480597(+) A-I      intronic chr1:202325202(+) A-I      intronic chr1:202554289(+) A-I      3'UTR chr1:202554290(+) A-I      3'UTR chr1:202533014(+) A-I      intronic chr1:202360086(+) A-I      intronic chr1:202554325(+) A-I      3'UTR chr1:202334459(+) A-I      intronic chr1:202554225(+) A-I      3'UTR chr1:202337993(+) A-I      intronic chr1:202418504(+) A-I      intronic chr1:202390688(+) A-I      intronic chr1:202554386(+) A-I      3'UTR chr1:202515717(+) A-I      intronic chr1:202325198(+) A-I      intronic chr1:202357441(+) A-I      intronic chr1:202426601(+) A-I      intronic chr1:202532445(+) A-I      intronic chr1:202554276(+) A-I      3'UTR chr1:202342229(+) A-I      intronic chr1:202532480(+) A-I      intronic chr1:202551847(+) A-I      3'UTR chr1:202358951(+) A-I      intronic chr1:202507210(+) A-I      intronic chr1:202341166(+) A-I      intronic chr1:202368791(+) A-I      intronic chr1:202426561(+) A-I      intronic chr1:202364164(+) A-I      intronic chr1:202517512(+) A-I      intronic chr1:202554253(+) A-I      3'UTR chr1:202554310(+) A-I      3'UTR chr1:202532986(+) A-I      intronic chr1:202551805(+) A-I      3'UTR chr1:202533045(+) A-I      intronic chr1:202363319(+) A-I      intronic chr1:202551850(+) A-I      3'UTR chr1:202540858(+) A-I      intronic chr1:202554399(+) A-I      3'UTR chr1:202341472(+) A-I      intronic chr1:202554279(+) A-I      3'UTR chr1:202328717(+) A-I      intronic chr1:202381340(+) A-I      intronic chr1:202446746(+) A-I      intronic chr1:202359682(+) A-I      intronic chr1:202328766(+) A-I      intronic chr1:202543485(+) A-I      intronic chr1:202532331(+) A-I      intronic chr1:202532492(+) A-I      intronic chr1:202532483(+) A-I      intronic chr1:202473478(+) A-I      intronic chr1:202351858(+) A-I      intronic chr1:202358859(+) A-I      intronic chr1:202332989(+) A-I      intronic chr1:202426602(+) A-I      intronic chr1:202543383(+) A-I      intronic chr1:202355227(+) A-I      intronic chr1:202390648(+) A-I      intronic chr1:202344873(+) A-I      intronic chr1:202532402(+) A-I      intronic chr1:202543456(+) A-I      intronic chr1:202363203(+) A-I      intronic chr1:202533082(+) A-I      intronic chr1:202543486(+) A-I      intronic chr1:202456901(+) A-I      intronic chr1:202455139(+) A-I      intronic chr1:202517851(+) A-I      intronic chr1:202390267(+) A-I      intronic chr1:202507251(+) A-I      intronic chr1:202323622(+) A-I      intronic chr1:202554393(+) A-I      3'UTR chr1:202517681(+) A-I      intronic chr1:202363762(+) A-I      intronic chr1:202551772(+) A-I      3'UTR chr1:202358657(+) A-I      intronic chr1:202321864(+) A-I      intronic chr1:202554250(+) A-I      3'UTR chr1:202346639(+) A-I      intronic chr1:202532378(+) A-I      intronic chr1:202507139(+) A-I      intronic chr1:202473337(+) A-I      intronic chr1:202341511(+) A-I      intronic chr1:202551759(+) A-I      3'UTR chr1:202540603(+) A-I      intronic chr1:202554199(+) A-I      3'UTR chr1:202425232(+) A-I      intronic chr1:202357362(+) A-I      intronic chr1:202551826(+) A-I      3'UTR chr1:202473322(+) A-I      intronic chr1:202484847(+) A-I      intronic chr1:202551841(+) A-I      3'UTR chr1:202480527(+) A-I      intronic chr1:202422017(+) A-I      intronic chr1:202532484(+) A-I      intronic chr1:202423793(+) A-I      intronic chr1:202554345(+) A-I      3'UTR chr1:202506265(+) A-I      intronic chr1:202334937(+) A-I      intronic chr1:202362350(+) A-I      intronic chr1:202328762(+) A-I      intronic chr1:202455676(+) A-I      intronic chr1:202506335(+) A-I      intronic chr1:202341772(+) A-I      intronic chr1:202551852(+) A-I      3'UTR chr1:202341790(+) A-I      intronic chr1:202551934(+) A-I      3'UTR chr1:202321762(+) A-I      intronic chr1:202360170(+) A-I      intronic chr1:202517846(+) A-I      intronic chr1:202323538(+) A-I      intronic chr1:202532519(+) A-I      intronic chr1:202323550(+) A-I      intronic chr1:202445766(+) A-I      intronic chr1:202532271(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PPP1R12B	chr1:202551934(+) A-I exon 3'UTR    15342557 chr1:202554194(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554199(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554211(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554218(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554225(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554237(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554253(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554257(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554273(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554276(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554279(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554285(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554308(+) A-I exon 3'UTR    15342557 chr1:202554310(+) A-I exon 3'UTR    15342557 chr1:202554325(+) A-I exon 3'UTR    15342557   //21960545 chr1:202554334(+) A-I exon 3'UTR    15342557 chr1:202554345(+) A-I exon 3'UTR    15342557   //21960545 chr1:202554393(+) A-I exon 3'UTR    15342557   //15258596 chr1:202554399(+) A-I exon 3'UTR    15342557   //15258596 chr1:202532378(+) A-I intron -    21960545 chr1:202532402(+) A-I intron -    21960545 chr1:202554156(+) A-I intron -    21960545 chr1:202328398(+) A-G intron -    22484847 chr1:202328441(+) A-G intron -    22484847 chr1:202328513(+) A-G intron -    22484847 chr1:202332989(+) A-G intron -    22484847 chr1:202334937(+) A-G intron -    22484847 chr1:202334954(+) A-G intron -    22484847 chr1:202337960(+) A-G intron -    22484847 chr1:202337972(+) A-G intron -    22484847 chr1:202337993(+) A-G intron -    22484847 chr1:202341542(+) A-G intron -    22484847 chr1:202358604(+) C-G intron -    22484847 chr1:202358657(+) A-G intron -    22484847 chr1:202364164(+) A-G intron -    22484847 chr1:202390648(+) A-G intron -    22484847 chr1:202390688(+) A-G intron -    22484847 chr1:202390689(+) A-G intron -    22484847 chr1:202425233(+) A-C intron -    22484847 chr1:202455742(+) A-G intron -    22484847 chr1:202455875(+) A-G intron -    22484847 chr1:202456776(+) A-G intron -    22484847 chr1:202456901(+) A-G intron -    22484847 chr1:202473281(+) A-G intron -    22484847 chr1:202473368(+) A-G intron -    22484847 chr1:202473374(+) A-G intron -    22484847 chr1:202473470(+) A-G intron -    22484847 chr1:202480414(+) A-G intron -    22484847 chr1:202480597(+) A-G intron -    22484847 chr1:202484847(+) A-G intron -    22484847 chr1:202494052(+) T-C intron -    22484847 chr1:202506289(+) A-G intron -    22484847 chr1:202506335(+) A-G intron -    22484847 chr1:202507139(+) A-G intron -    22484847 chr1:202507165(+) A-G intron -    22484847 chr1:202507178(+) A-G intron -    22484847 chr1:202507218(+) A-G intron -    22484847 chr1:202507385(+) A-G intron -    22484847 chr1:202512607(+) A-G intron -    22484847 chr1:202532271(+) A-G intron -    22484847 chr1:202532378(+) A-G intron -    22484847 chr1:202532426(+) A-G intron -    22484847 chr1:202532940(+) A-G intron -    22484847 chr1:202532941(+) A-G intron -    22484847 chr1:202551847(+) A-G intron -    22484847 chr1:202551850(+) A-G intron -    22484847 chr1:202554199(+) A-G intron -    22484847 chr1:202554218(+) A-G intron -    22484847 chr1:202554257(+) A-G intron -    22484847 chr1:202554325(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PPP1R12B	chr1:202317987-202317988(+) m6A CDS       24284625//24209618 chr1:202399876-202399877(+) m6A 3'UTR//CDS//exon       24981863 chr1:202399887-202399888(+) m6A 3'UTR//CDS//exon       24981863 chr1:202399907-202399908(+) m6A 3'UTR//CDS//exon       24981863 chr1:202400635-202400636(+) m6A 3'UTR//CDS//exon       24981863 chr1:202407673-202407674(+) m6A exon//intron       22608085 chr1:202408072-202408073(+) m6A intron       22608085 chr1:202408165-202408166(+) m6A intron       24284625//22608085 chr1:202408206-202408207(+) m6A intron       24284625//22608085 chr1:202408231-202408232(+) m6A intron       22608085 chr1:202462277-202462278(+) m6A 5'UTR//CDS//exon       - chr1:202462338-202462339(+) m6A 5'UTR//CDS//exon       - chr1:202464457-202464458(+) m6A 5'UTR//CDS//exon       24981863 chr1:202464494-202464495(+) m6A 5'UTR//CDS//exon       24981863 chr1:202464528-202464529(+) m6A 5'UTR//CDS//exon       24981863 chr1:202464567-202464568(+) m6A 5'UTR//CDS//exon       24981863 chr1:202464577-202464578(+) m6A 5'UTR//CDS//exon       24981863 chr1:202464601-202464602(+) m6A CDS//exon       24981863 chr1:202464801-202464802(+) m6A CDS//exon       24981863 chr1:202465917-202465918(+) m6A CDS//exon       24981863 chr1:202536607-202536608(+) m6A exon//intron       24981863 chr1:202536714-202536715(+) m6A exon//intron       24981863 chr1:202536910-202536911(+) m6A CDS//exon       24981863 chr1:202536920-202536921(+) m6A CDS//exon       24981863 chr1:202544146-202544147(+) m6A CDS//exon//intron       24981863 chr1:202544156-202544157(+) m6A CDS//exon//intron       24981863 chr1:202549796-202549797(+) m6A 3'UTR//exon       24981863 chr1:202549977-202549978(+) m6A 3'UTR       24981863 chr1:202550149-202550150(+) m6A 3'UTR       24981863 chr1:202550252-202550253(+) m6A 3'UTR       24981863 chr1:202553537-202553538(+) m6A 3'UTR       24981863 chr1:202553579-202553580(+) m6A 3'UTR       24981863 chr1:202553638-202553639(+) m6A 3'UTR       24981863 chr1:202553707-202553708(+) m6A 3'UTR       24981863 chr1:202553820-202553821(+) m6A 3'UTR       24981863 chr1:202555093-202555094(+) m6A 3'UTR       24981863 chr1:202555137-202555138(+) m6A 3'UTR       24981863 chr1:202555177-202555178(+) m6A 3'UTR       24981863 chr1:202555220-202555221(+) m6A 3'UTR       24981863 chr1:202555290-202555291(+) m6A 3'UTR       24981863 chr1:202555312-202555313(+) m6A 3'UTR       25456834//24981863 chr1:202555343-202555344(+) m6A 3'UTR       25456834//24981863//22608085 chr1:202555375-202555376(+) m6A 3'UTR       25456834//24981863//22608085 chr1:202555405-202555406(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:202555469-202555470(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:202555523-202555524(+) m6A 3'UTR       25456834//24981863 chr1:202555646-202555647(+) m6A 3'UTR       24981863 chr1:202555658-202555659(+) m6A 3'UTR       24981863 chr1:202559793-202559794(+) m6A 3'UTR       27773535 chr1:202559799-202559800(+) m6A 3'UTR       27773535 chr1:202560093-202560094(+) m6A 3'UTR       27773535 chr1:202560135-202560136(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PPP1R12B	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10b
Interactor2: PPP1R12B

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	cRep//miRanda//PARalyzer//PITA//Rep//Targetscan
Support Database	RepTar//ViRBase//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	RepTar//ViRBase//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-3 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6B BC-3 derived 3'UTR clusters with seed matches to expressed miRNAs.