Detail Information

Basic Information:


  VIRBase ID:  

VHID00425743

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-3p:           PHOSPHO2-KLHL23:      

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Interactor Information:


Interactor1 Interactor2
Symbol kshv-miR-K12-10a-3p PHOSPHO2-KLHL23
miRBase
Accession/Entrez ID
MIMAT0002179 100526832
Organism Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PHOSPHO2-KLHL23
chr2:170559819(+) A-I intron -    15258596
chr2:170559835(+) A-I intron -    15258596
chr2:170559843(+) A-I intron -    15258596
chr2:170606427(+) A-I exon 3'UTR    15342557
chr2:170606467(+) A-I exon 3'UTR    15342557
chr2:170606527(+) A-I exon 3'UTR    15342557
chr2:170606588(+) A-I exon 3'UTR    15342557
chr2:170606724(+) A-I exon 3'UTR    15342557
chr2:170607750(+) A-I exon 3'UTR    15342557
chr2:170566019(+) A-I intron -    22327324
chr2:170558876(+) A-I intron -    21960545
chr2:170559002(+) A-I intron -    21960545
chr2:170559738(+) A-I intron -    21960545
chr2:170558928(+) A-I intron -    21960545
chr2:170565983(+) A-I intron -    21960545
chr2:170560885(+) A-G intron -    22484847
chr2:170562760(+) A-G intron -    22484847
chr2:170558876(+) A-G intron -    22484847
chr2:170558963(+) A-G intron -    22484847
chr2:170558969(+) A-G intron -    22484847
chr2:170558976(+) A-G intron -    22484847
chr2:170559003(+) A-G intron -    22484847
chr2:170559843(+) A-G intron -    22484847
chr2:170559852(+) A-G intron -    22484847
chr2:170559858(+) A-G intron -    22484847
chr2:170562041(+) A-G intron -    22484847
chr2:170563216(+) A-G intron -    22484847
chr2:170563553(+) A-G intron -    22484847
chr2:170566019(+) A-G intron -    22484847
chr2:170566020(+) A-G intron -    22484847
chr2:170566081(+) A-G intron -    22484847
chr2:170566097(+) A-G intron -    22484847
chr2:170566200(+) A-G intron -    22484847
chr2:170566217(+) A-G intron -    22484847

Interaction Network (The top 100 interactions):


Interactor1: kshv-miR-K12-10a-3p
Interactor2: PHOSPHO2-KLHL23

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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