Basic Information:

  VIRBase ID:  

VHID00425321

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-3p:  MIMAT0002179          ZNF513:  NM_001201459     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-3p	ZNF513
miRBase Accession/Entrez ID	MIMAT0002179	130557
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HMFT0656//RP58//Zfp513

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF513	chr2:27600111-27600112(-) m6A 3'UTR       - chr2:27600168-27600169(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr2:27600184-27600185(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr2:27600263-27600264(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//22608085 chr2:27600271-27600272(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//22608085 chr2:27600307-27600308(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:27600328-27600329(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:27600375-27600376(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:27600410-27600411(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:27600421-27600422(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:27600449-27600450(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr2:27600583-27600584(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr2:27600664-27600665(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr2:27600711-27600712(-) m6A CDS//exon       24284625//25456834//27773535//22608085 chr2:27600896-27600897(-) m6A CDS//exon       24284625//25456834//27773535//27371828//22608085 chr2:27601077-27601078(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:27601094-27601095(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:27601122-27601123(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:27601133-27601134(-) m6A CDS//intron       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:27601174-27601175(-) m6A CDS//intron       24284625//25456834//24981863//27371828//27773536//22608085 chr2:27601621-27601622(-) m6A CDS//intron       24284625 chr2:27601917-27601918(-) m6A CDS       24284625//24981863//27371828 chr2:27602967-27602968(-) m6A CDS       24284625//24981863//27371828 chr2:27603086-27603087(-) m6A 5'UTR//CDS       24284625//27773535//27371828 chr2:27603102-27603103(-) m6A 5'UTR//CDS       24284625//27773535//27371828 chr2:27603231-27603232(-) m6A 5'UTR//intron       24284625//25456834 chr2:27603260-27603261(-) m6A 5'UTR//intron       25456834 chr2:27603467-27603468(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF513	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-3p
Interactor2: ZNF513

Evidence Support:

Prediction-Evidence	RNAHybrid//Targetscan
Support Database	VmiReg