Basic Information:

  VIRBase ID:  

VHID00423849

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-3p:  MIMAT0002179          FOSL1:  NR_125339     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-3p	FOSL1
miRBase Accession/Entrez ID	MIMAT0002179	8061
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FRA//fra-1//FRA1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FOSL1	chr11:65665823(-) A-I      intronic chr11:65665860(-) A-I      intronic chr11:65665834(-) A-I      intronic chr11:65665816(-) A-I      intronic chr11:65666426(-) A-I      intronic chr11:65666430(-) A-I      intronic chr11:65665762(-) A-I      intronic chr11:65665705(-) A-I      intronic chr11:65665503(-) A-I      intronic chr11:65662759(-) A-I      intronic chr11:65665492(-) A-I      intronic chr11:65664865(-) A-I      intronic chr11:65665838(-) A-I      intronic chr11:65666256(-) A-I      intronic chr11:65662514(-) A-I      intronic chr11:65665395(-) A-I      intronic chr11:65663623(-) A-I      intronic chr11:65666370(-) A-I      intronic chr11:65662624(-) A-I      intronic chr11:65662845(-) A-I      intronic chr11:65665879(-) A-I      intronic chr11:65664812(-) A-I      intronic chr11:65665859(-) A-I      intronic chr11:65665812(-) A-I      intronic chr11:65665874(-) A-I      intronic chr11:65666227(-) A-I      intronic chr11:65665883(-) A-I      intronic chr11:65666226(-) A-I      intronic chr11:65666303(-) A-I      intronic chr11:65665821(-) A-I      intronic chr11:65665393(-) A-I      intronic chr11:65666264(-) A-I      intronic chr11:65661212(-) A-I      intronic chr11:65666195(-) A-I      intronic chr11:65665676(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FOSL1	chr11:65664865(-) A-G intron -    22484847 chr11:65665883(-) A-G intron -    22484847 chr11:65666195(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FOSL1	chr11:65659522-65659523(-) m6A 3'UTR       24981863 chr11:65659574-65659575(-) m6A 3'UTR       24981863 chr11:65659596-65659597(-) m6A 3'UTR       24981863 chr11:65659615-65659616(-) m6A 3'UTR       24981863 chr11:65659672-65659673(-) m6A 3'UTR       24981863 chr11:65659725-65659726(-) m6A 3'UTR       24981863 chr11:65659872-65659873(-) m6A 3'UTR       24284625//27773535 chr11:65659900-65659901(-) m6A 3'UTR       24284625//24209618//27773535 chr11:65659944-65659945(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr11:65660075-65660076(-) m6A 3'UTR       24284625//24981863//27773535 chr11:65660121-65660122(-) m6A 3'UTR       24284625//24981863//27773535 chr11:65660225-65660226(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr11:65660276-65660277(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr11:65660402-65660403(-) m6A 3'UTR//CDS       24284625//24209618//27773535 chr11:65660539-65660540(-) m6A 3'UTR//5'UTR//CDS       24284625//24209618//24981863//27773535 chr11:65660627-65660628(-) m6A 3'UTR//5'UTR//CDS       24284625//24209618//24981863//27773535 chr11:65660755-65660756(-) m6A 3'UTR//5'UTR//CDS       24284625//24209618//27773535 chr11:65660763-65660764(-) m6A 5'UTR//CDS       24284625//24209618//27773535 chr11:65661505-65661506(-) m6A 5'UTR//CDS//intron       24284625//24209618 chr11:65661518-65661519(-) m6A 5'UTR//CDS//intron       24284625//24209618 chr11:65661545-65661546(-) m6A 5'UTR//CDS//intron       24209618 chr11:65664282-65664283(-) m6A CDS//intron       24284625//24209618 chr11:65667789-65667790(-) m6A CDS//intron       24209618//25456834//24981863 chr11:65667799-65667800(-) m6A CDS//intron       24209618//25456834//24981863 chr11:65667850-65667851(-) m6A 5'UTR//intron       24209618//25456834//24981863 chr11:65667876-65667877(-) m6A 5'UTR       24209618//25456834//24981863 chr11:65667900-65667901(-) m6A 5'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FOSL1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-3p
Interactor2: FOSL1

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg