Basic Information:

  VIRBase ID:  

VHID00423841

  Virus:  

Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      kshv-miR-K12-10a-3p:  MIMAT0002179          PSCA:  NR_033343     

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Interactor Information:

	Interactor1	Interactor2
Symbol	kshv-miR-K12-10a-3p	PSCA
miRBase Accession/Entrez ID	MIMAT0002179	8000
Organism	Human gammaherpesvirus 8 (Kaposi's sarcoma herpesvirus, KSHV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PRO232

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PSCA	chr8:143763262-143763263(+) m6A exon//intron       24284625 chr8:143763937-143763938(+) m6A 3'UTR       22575960 chr8:143763979-143763980(+) m6A 3'UTR       22575960 chr8:143763989-143763990(+) m6A 3'UTR       22575960 chr8:143763997-143763998(+) m6A 3'UTR       22575960 chr8:143764124-143764125(+) m6A 3'UTR       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PSCA	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: kshv-miR-K12-10a-3p
Interactor2: PSCA

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg