Detail Information

Basic Information:


  VIRBase ID:  

VHID00422525

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART22:           PAQR9:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART22 PAQR9
miRBase
Accession/Entrez ID
MIMAT0010132 344838
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - BLNC1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PAQR9
chr3:142668508-142668509(-) m6A 3'UTR       27773535
chr3:142668572-142668573(-) m6A 3'UTR       27773535
chr3:142668577-142668578(-) m6A 3'UTR       27773535
chr3:142668615-142668616(-) m6A 3'UTR       27773535
chr3:142668627-142668628(-) m6A 3'UTR       27773535
chr3:142668644-142668645(-) m6A 3'UTR       27773535
chr3:142668714-142668715(-) m6A 3'UTR       27773535
chr3:142668746-142668747(-) m6A 3'UTR       27773535
chr3:142668760-142668761(-) m6A 3'UTR       27773535
chr3:142668768-142668769(-) m6A 3'UTR       27773535
chr3:142668777-142668778(-) m6A 3'UTR       27773535
chr3:142668820-142668821(-) m6A 3'UTR       27773535
chr3:142668866-142668867(-) m6A 3'UTR       27773535
chr3:142680179-142680180(-) m6A 3'UTR//intron       24981863//27773535
chr3:142680216-142680217(-) m6A 3'UTR//intron       24981863//27773535
chr3:142680249-142680250(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr3:142680260-142680261(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr3:142680314-142680315(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr3:142680357-142680358(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr3:142680362-142680363(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr3:142680517-142680518(-) m6A 3'UTR//intron       27773535
chr3:142680556-142680557(-) m6A 3'UTR//intron       24981863//27773535
chr3:142680574-142680575(-) m6A 3'UTR//intron       24981863//27773535
chr3:142680633-142680634(-) m6A 3'UTR//intron       24981863//27773535
chr3:142681369-142681370(-) m6A CDS       27773535
chr3:142681576-142681577(-) m6A CDS       25456834//24981863//22608085
chr3:142681708-142681709(-) m6A CDS       25456834//24981863//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PAQR9
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART22
Interactor2: PAQR9

Evidence Support:


Prediction-Evidence miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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