Basic Information:

  VIRBase ID:  

VHID00419009

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART22:  MIMAT0010132          MED23:  NM_015979     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART22	MED23
miRBase Accession/Entrez ID	MIMAT0010132	9439
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARC130//CRSP130//CRSP133//CRSP3//DRIP130//MRT18//SUR-2//SUR2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MED23	chr6:131912353(-) A-I      intronic chr6:131905930(-) A-I      intronic chr6:131941487(-) A-I      intronic chr6:131905933(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MED23	chr6:131905933(-) A-G intron -    22484847 chr6:131918638(-) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MED23	chr6:131907890-131907891(-) m6A 3'UTR//exon//intron       27773535 chr6:131907920-131907921(-) m6A 3'UTR//exon//intron       27773535 chr6:131907928-131907929(-) m6A 3'UTR//exon//intron       27773535 chr6:131907964-131907965(-) m6A 3'UTR//exon//intron       27773535 chr6:131908416-131908417(-) m6A 3'UTR//exon//intron       27773535 chr6:131908760-131908761(-) m6A 3'UTR//exon//intron       24284625//24209618//24981863//27773535//22608085 chr6:131908766-131908767(-) m6A 3'UTR//exon//intron       24284625//24209618//24981863//27773535//22608085 chr6:131908811-131908812(-) m6A 3'UTR//exon//intron       24284625//24209618//24981863//27773535//22608085 chr6:131908879-131908880(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr6:131927737-131927738(-) m6A CDS       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MED23	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART22
Interactor2: MED23

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg