Basic Information:

  VIRBase ID:  

VHID00417775

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART22:  MIMAT0010132          IFIT1:  NM_001270929     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART22	IFIT1
miRBase Accession/Entrez ID	MIMAT0010132	3434
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C56//G10P1//IFI-56//IFI-56K//IFI56//IFIT-1//IFNAI1//ISG56//P56//RNM561

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IFIT1	chr10:91157322(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IFIT1	chr10:91152396-91152397(+) m6A 5'UTR       24981863 chr10:91152435-91152436(+) m6A 5'UTR       24981863 chr10:91152889-91152890(+) m6A 5'UTR//intron       - chr10:91158594-91158595(+) m6A intron       24981863 chr10:91162141-91162142(+) m6A CDS       27773535 chr10:91162171-91162172(+) m6A CDS       27773535 chr10:91162217-91162218(+) m6A CDS       24981863//27773535 chr10:91162270-91162271(+) m6A CDS       24209618//24981863//27773535//22575960//22608085 chr10:91162286-91162287(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr10:91162361-91162362(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr10:91162377-91162378(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91162387-91162388(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91162399-91162400(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91162456-91162457(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91162543-91162544(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91162552-91162553(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91162675-91162676(+) m6A CDS       24209618//24981863//22608085 chr10:91162724-91162725(+) m6A CDS       24209618//24981863//22608085 chr10:91162782-91162783(+) m6A CDS       24981863//27773535//22608085 chr10:91162872-91162873(+) m6A CDS       24981863//27773535 chr10:91162972-91162973(+) m6A CDS       24981863//27773535//22608085 chr10:91162987-91162988(+) m6A CDS       24981863//27773535//22608085 chr10:91163065-91163066(+) m6A CDS       24981863//27773535//22608085 chr10:91163141-91163142(+) m6A CDS       24209618//24981863//27773535//22608085 chr10:91163157-91163158(+) m6A CDS       24209618//24981863//27773535//22608085 chr10:91163167-91163168(+) m6A CDS       24209618//24981863//27773535//22608085 chr10:91163258-91163259(+) m6A CDS       24209618//24981863//27773535//22575960//22608085 chr10:91163318-91163319(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91163426-91163427(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91163446-91163447(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91163456-91163457(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:91163554-91163555(+) m6A 3'UTR       24981863//27773535//22608085 chr10:91163633-91163634(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IFIT1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART22
Interactor2: IFIT1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg