Detail Information

Basic Information:


  VIRBase ID:  

VHID00415690

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART21-3p:           RNF141:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART21-3p RNF141
miRBase
Accession/Entrez ID		 MIMAT0010131 50862
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - RFP141//ZFP26//ZNF230

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RNF141
chr11:10534238(-) A-I      3'UTR
chr11:10535402(-) A-I      3'UTR
chr11:10535496(-) A-I      3'UTR
chr11:10535502(-) A-I      3'UTR
chr11:10534242(-) A-I      3'UTR
chr11:10535362(-) A-I      3'UTR
chr11:10534231(-) A-I      3'UTR
chr11:10535380(-) A-I      3'UTR
chr11:10535372(-) A-I      3'UTR
chr11:10535356(-) A-I      3'UTR
chr11:10535339(-) A-I      3'UTR
chr11:10535391(-) A-I      3'UTR
chr11:10535495(-) A-I      3'UTR
chr11:10535392(-) A-I      3'UTR
chr11:10535455(-) A-I      3'UTR
chr11:10535418(-) A-I      3'UTR
chr11:10535405(-) A-I      3'UTR
chr11:10535393(-) A-I      3'UTR
chr11:10535394(-) A-I      3'UTR
chr11:10534263(-) A-I      3'UTR
chr11:10534281(-) A-I      3'UTR
chr11:10534282(-) A-I      3'UTR
chr11:10534290(-) A-I      3'UTR
chr11:10535397(-) A-I      3'UTR
chr11:10535388(-) A-I      3'UTR
chr11:10535259(-) A-I      3'UTR
chr11:10535361(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RNF141
chr11:10535102-10535103(-) m6A 3'UTR//exon       27773535
chr11:10535234-10535235(-) m6A 3'UTR//exon       24981863
chr11:10535253-10535254(-) m6A 3'UTR//exon       24981863
chr11:10535263-10535264(-) m6A 3'UTR//exon       24981863
chr11:10555699-10555700(-) m6A CDS       27371828
chr11:10555717-10555718(-) m6A 5'UTR       27371828
chr11:10555749-10555750(-) m6A 5'UTR       27371828
chr11:10562323-10562324(-) m6A 5'UTR//intron       24981863//27371828
chr11:10562401-10562402(-) m6A 5'UTR//intron       24981863//27371828
chr11:10562674-10562675(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RNF141
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART21-3p
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART21-3p
Interactor2: RNF141

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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