Detail Information

Basic Information:


  VIRBase ID:  

VHID00414434

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART21-3p:           COX15:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART21-3p COX15
miRBase
Accession/Entrez ID		 MIMAT0010131 1355
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CEMCOX2//MC4DN6

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR COX15
chr10:101479443(-) A-I      intronic
chr10:101479476(-) A-I      intronic
chr10:101479515(-) A-I      intronic
chr10:101480102(-) A-I      intronic
chr10:101479424(-) A-I      intronic
chr10:101479958(-) A-I      intronic
chr10:101479957(-) A-I      intronic
chr10:101473689(-) A-I      3'UTR
chr10:101479396(-) A-I      intronic
chr10:101473547(-) A-I      3'UTR
chr10:101473695(-) A-I      3'UTR
chr10:101479417(-) A-I      intronic
chr10:101472702(-) A-I      3'UTR
chr10:101479386(-) A-I      intronic
chr10:101479167(-) A-I      intronic
chr10:101479115(-) A-I      intronic
chr10:101473702(-) A-I      3'UTR
chr10:101475033(-) A-I      intronic
chr10:101475075(-) A-I      intronic
chr10:101475032(-) A-I      intronic
chr10:101480085(-) A-I      intronic
chr10:101475078(-) A-I      intronic
chr10:101480195(-) A-I      intronic
chr10:101475097(-) A-I      intronic
chr10:101479042(-) A-I      intronic
chr10:101475006(-) A-I      intronic
chr10:101479376(-) A-I      intronic
chr10:101479441(-) A-I      intronic
chr10:101474967(-) A-I      intronic
chr10:101479527(-) A-I      intronic
chr10:101479945(-) A-I      intronic
chr10:101479117(-) A-I      intronic
chr10:101475001(-) A-I      intronic
chr10:101479044(-) A-I      intronic
chr10:101480151(-) A-I      intronic
chr10:101479464(-) A-I      intronic
chr10:101479943(-) A-I      intronic
chr10:101480036(-) A-I      intronic
chr10:101475887(-) A-I      intronic
chr10:101479976(-) A-I      intronic
chr10:101480078(-) A-I      intronic
chr10:101480080(-) A-I      intronic
chr10:101474963(-) A-I      intronic
chr10:101480199(-) A-I      intronic
chr10:101475072(-) A-I      intronic
chr10:101479372(-) A-I      intronic
chr10:101473564(-) A-I      3'UTR
chr10:101473570(-) A-I      3'UTR
chr10:101473578(-) A-I      3'UTR
chr10:101473727(-) A-I      3'UTR
chr10:101473633(-) A-I      3'UTR
chr10:101473725(-) A-I      3'UTR
chr10:101473663(-) A-I      3'UTR
chr10:101473577(-) A-I      3'UTR
chr10:101473556(-) A-I      3'UTR
chr10:101473664(-) A-I      3'UTR
chr10:101473483(-) A-I      3'UTR
chr10:101473464(-) A-I      3'UTR
chr10:101473505(-) A-I      3'UTR
chr10:101473542(-) A-I      3'UTR
chr10:101473561(-) A-I      3'UTR
chr10:101479520(-) A-I      intronic
chr10:101479494(-) A-I      intronic
chr10:101479442(-) A-I      intronic
chr10:101480086(-) A-I      intronic
chr10:101479415(-) A-I      intronic
chr10:101479109(-) A-I      intronic
chr10:101474962(-) A-I      intronic
chr10:101479512(-) A-I      intronic
chr10:101484122(-) A-I      intronic
chr10:101480189(-) A-I      intronic
chr10:101479105(-) A-I      intronic
chr10:101479430(-) A-I      intronic
chr10:101479521(-) A-I      intronic
chr10:101479985(-) A-I      intronic
chr10:101479467(-) A-I      intronic
chr10:101479416(-) A-I      intronic
chr10:101480019(-) A-I      intronic
chr10:101480156(-) A-I      intronic
chr10:101480022(-) A-I      intronic
chr10:101476017(-) A-I      intronic
chr10:101475974(-) A-I      intronic
chr10:101480119(-) A-I      intronic
chr10:101479197(-) A-I      intronic
chr10:101475992(-) A-I      intronic
chr10:101480039(-) A-I      intronic
chr10:101480159(-) A-I      intronic
chr10:101479490(-) A-I      intronic
chr10:101480093(-) A-I      intronic
chr10:101473595(-) A-I      3'UTR
chr10:101473676(-) A-I      3'UTR
chr10:101473614(-) A-I      3'UTR
chr10:101473626(-) A-I      3'UTR
chr10:101473506(-) A-I      3'UTR
chr10:101473692(-) A-I      3'UTR
chr10:101473604(-) A-I      3'UTR
chr10:101473602(-) A-I      3'UTR
chr10:101480090(-) A-I      intronic
chr10:101479039(-) A-I      intronic
chr10:101473643(-) A-I      3'UTR
chr10:101479380(-) A-I      intronic
chr10:101473510(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED COX15
chr10:101479039(-) A-I intron -    22327324
chr10:101479044(-) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase COX15
chr10:101472289-101472290(-) Y 3'UTR       26075521
chr10:101473269-101473270(-) Y intron       26075521
chr10:101474279-101474280(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr10:101474291-101474292(-) Gm 3'UTR//intron       -
chr10:101474318-101474319(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr10:101474332-101474333(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085
chr10:101474364-101474365(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate COX15
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART21-3p
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART21-3p
Interactor2: COX15

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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