Basic Information:

  VIRBase ID:  

VHID00414085

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART21-5p:  MIMAT0010130          PAQR3:  NR_146465     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART21-5p	PAQR3
miRBase Accession/Entrez ID	MIMAT0010130	152559
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RKTG

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PAQR3	chr4:79839157(-) A-I      3'UTR chr4:79839152(-) A-I      3'UTR chr4:79839151(-) A-I      3'UTR chr4:79839144(-) A-I      3'UTR chr4:79839143(-) A-I      3'UTR chr4:79839194(-) A-I      3'UTR chr4:79839198(-) A-I      3'UTR chr4:79839158(-) A-I      3'UTR chr4:79839131(-) A-I      3'UTR chr4:79814994(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PAQR3	chr4:79832156-79832157(-) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr4:79832263-79832264(-) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chr4:79832282-79832283(-) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chr4:79832353-79832354(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr4:79832635-79832636(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr4:79832668-79832669(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr4:79832873-79832874(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr4:79832993-79832994(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr4:79833121-79833122(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr4:79833130-79833131(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr4:79833220-79833221(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr4:79833240-79833241(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr4:79860422-79860423(-) m6A 5'UTR       24209618//27371828//27773536 chr4:79860492-79860493(-) m6A 5'UTR       24209618//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PAQR3	Chromatin K562 cells     - Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART21-5p
Interactor2: PAQR3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg