Basic Information:

  VIRBase ID:  

VHID00413561

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART21-5p:  MIMAT0010130          CHIC1:  NM_001039840     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART21-5p	CHIC1
miRBase Accession/Entrez ID	MIMAT0010130	53344
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BRX

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CHIC1	chrX:72876063(+) A-I      intronic chrX:72876103(+) A-I      intronic chrX:72876105(+) A-I      intronic chrX:72876102(+) A-I      intronic chrX:72829341(+) A-I      intronic chrX:72876081(+) A-I      intronic chrX:72876051(+) A-I      intronic chrX:72876060(+) A-I      intronic chrX:72876062(+) A-I      intronic chrX:72829286(+) A-I      intronic chrX:72828888(+) A-I      intronic chrX:72828880(+) A-I      intronic chrX:72828870(+) A-I      intronic chrX:72851237(+) A-I      intronic chrX:72829307(+) A-I      intronic chrX:72829338(+) A-I      intronic chrX:72829478(+) A-I      intronic chrX:72829337(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CHIC1	chrX:72783079-72783080(+) m6A 5'UTR       24981863 chrX:72783167-72783168(+) m6A CDS       25456834//24981863 chrX:72783187-72783188(+) m1A CDS       26863196 chrX:72783295-72783296(+) m1A CDS       26863196 chrX:72901235-72901236(+) m6A 3'UTR//intron       24981863//22608085 chrX:72901293-72901294(+) m6A 3'UTR//intron       24981863//22608085 chrX:72901308-72901309(+) m6A 3'UTR//intron       24981863//22608085 chrX:72901380-72901381(+) m6A 3'UTR//intron       24981863 chrX:72901390-72901391(+) m6A 3'UTR//intron       24981863 chrX:72906464-72906465(+) m6A 3'UTR       24284625//24981863//22575960//22608085 chrX:72906472-72906473(+) m6A 3'UTR       24284625//24981863//22575960//22608085 chrX:72906527-72906528(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chrX:72906562-72906563(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chrX:72906657-72906658(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chrX:72906700-72906701(+) m6A 3'UTR       24284625//24981863//22608085 chrX:72906707-72906708(+) m6A 3'UTR       24284625//24981863//22608085 chrX:72906793-72906794(+) m6A 3'UTR       24284625//24981863//22608085 chrX:72906844-72906845(+) m6A 3'UTR       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CHIC1	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART21-5p
Interactor2: CHIC1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg