Basic Information:

  VIRBase ID:  

VHID00413396

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART21-5p:  MIMAT0010130          KHNYN:  NM_015299     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART21-5p	KHNYN
miRBase Accession/Entrez ID	MIMAT0010130	23351
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA0323

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KHNYN	chr14:24909033(+) A-I      3'UTR chr14:24909007(+) A-I      3'UTR chr14:24909028(+) A-I      3'UTR chr14:24909036(+) A-I      3'UTR chr14:24909002(+) A-I      3'UTR chr14:24909001(+) A-I      3'UTR chr14:24908974(+) A-I      3'UTR chr14:24908987(+) A-I      3'UTR chr14:24908993(+) A-I      3'UTR chr14:24909000(+) A-I      3'UTR chr14:24909029(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KHNYN	chr14:24898591-24898592(+) m6A 5'UTR       24981863 chr14:24898608-24898609(+) m6A 5'UTR       24981863 chr14:24899157-24899158(+) m6A 5'UTR//intron       24981863 chr14:24899177-24899178(+) m6A 5'UTR//intron       24981863 chr14:24899204-24899205(+) m6A 5'UTR//intron       24209618//24981863 chr14:24899296-24899297(+) m6A 5'UTR//intron       24209618//25456834//24981863 chr14:24899517-24899518(+) m6A 5'UTR//intron       24284625//25456834 chr14:24899533-24899534(+) m6A 5'UTR//intron       24284625//25456834 chr14:24899550-24899551(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:24899612-24899613(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:24899665-24899666(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:24899710-24899711(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:24899728-24899729(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:24899780-24899781(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr14:24899863-24899864(+) m6A 5'UTR//intron       24284625//24981863 chr14:24900000-24900001(+) m6A CDS       24284625//24209618//27371828 chr14:24900013-24900014(+) m6A CDS       24284625//24209618//27371828 chr14:24900069-24900070(+) m6A CDS       24284625//24209618//27371828 chr14:24900078-24900079(+) m6A CDS       24284625//24209618//27371828 chr14:24900697-24900698(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr14:24900727-24900728(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr14:24900900-24900901(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24900913-24900914(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24900954-24900955(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr14:24901173-24901174(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr14:24901189-24901190(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr14:24901218-24901219(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr14:24901249-24901250(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr14:24901561-24901562(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24901581-24901582(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24901599-24901600(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24901617-24901618(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24901626-24901627(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24901773-24901774(+) m6A CDS       24284625//25456834//22608085 chr14:24901989-24901990(+) m6A CDS       24284625 chr14:24904844-24904845(+) m6A exon//intron       - chr14:24905060-24905061(+) m6A exon//intron       27773535 chr14:24905210-24905211(+) m6A exon//intron       27773535 chr14:24905217-24905218(+) m6A exon//intron       27773535 chr14:24905273-24905274(+) m6A 5'UTR//exon//intron       27773535 chr14:24905302-24905303(+) m6A 5'UTR//CDS//exon       27773535 chr14:24905339-24905340(+) m6A 5'UTR//CDS//exon       27773535 chr14:24905619-24905620(+) m6A CDS//exon       24284625//27773535 chr14:24906289-24906290(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr14:24906298-24906299(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24906347-24906348(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr14:24906356-24906357(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:24906414-24906415(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24906447-24906448(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24906631-24906632(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr14:24906648-24906649(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr14:24906668-24906669(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22608085 chr14:24906776-24906777(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24906782-24906783(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr14:24906891-24906892(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr14:24906962-24906963(+) m6A 3'UTR//exon       24209618 chr14:24907010-24907011(+) m6A 3'UTR//exon       24209618 chr14:24907434-24907435(+) m6A 3'UTR//exon       24284625//24981863 chr14:24907490-24907491(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr14:24908300-24908301(+) m6A 3'UTR       27773535 chr14:24908316-24908317(+) m6A 3'UTR       27773535 chr14:24908382-24908383(+) m6A 3'UTR       27773535 chr14:24908604-24908605(+) m6A 3'UTR       24981863 chr14:24908610-24908611(+) m6A 3'UTR       24981863 chr14:24908836-24908837(+) m6A 3'UTR       25456834//24981863 chr14:24908864-24908865(+) m6A 3'UTR       25456834//24981863 chr14:24908886-24908887(+) m6A 3'UTR       25456834//24981863 chr14:24908979-24908980(+) m6A 3'UTR       24981863//22608085 chr14:24909001-24909002(+) m6A 3'UTR       24981863//22608085 chr14:24909052-24909053(+) m6A 3'UTR       24981863 chr14:24909064-24909065(+) m6A 3'UTR       24981863 chr14:24909069-24909070(+) m6A 3'UTR       24981863 chr14:24909134-24909135(+) m6A 3'UTR       24981863//26404942 chr14:24909155-24909156(+) m6A 3'UTR       24981863//26404942 chr14:24909170-24909171(+) m6A 3'UTR       24981863//26404942 chr14:24909190-24909191(+) m6A 3'UTR       24981863//26404942 chr14:24909259-24909260(+) m6A 3'UTR       27773535 chr14:24909488-24909489(+) m6A 3'UTR       - chr14:24909529-24909530(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KHNYN	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART21-5p
Interactor2: KHNYN

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg