Basic Information:

  VIRBase ID:  

VHID00413002

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART21-5p:  MIMAT0010130          CCL2:  NM_002982     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART21-5p	CCL2
miRBase Accession/Entrez ID	MIMAT0010130	6347
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GDCF-2//HC11//HSMCR30//MCAF//MCP-1//MCP1//SCYA2//SMC-CF

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CCL2	chr17:32582314-32582315(+) m6A 5'UTR//exon       24981863//26404942 chr17:32582326-32582327(+) m6A 5'UTR//exon       24981863//26404942 chr17:32582341-32582342(+) m6A 5'UTR//exon       24981863//26404942 chr17:32583747-32583748(+) m6A 3'UTR//CDS//exon       24981863 chr17:32583808-32583809(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr17:32583817-32583818(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr17:32583825-32583826(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr17:32583831-32583832(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr17:32583840-32583841(+) m6A CDS//exon       24981863//26404942 chr17:32583846-32583847(+) m6A 3'UTR//exon       24981863//26404942 chr17:32583905-32583906(+) m6A 3'UTR//exon       24981863//26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CCL2	Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART21-5p
Interactor2: CCL2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg