Basic Information:

  VIRBase ID:  

VHID00412240

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-3p:  MIMAT0009205          SETD3:  NM_199123     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-3p	SETD3
miRBase Accession/Entrez ID	MIMAT0009205	84193
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C14orf154//hSETD3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SETD3	chr14:99918011(-) A-I      intronic chr14:99911023(-) A-I      intronic chr14:99917982(-) A-I      intronic chr14:99918045(-) A-I      intronic chr14:99918040(-) A-I      intronic chr14:99918000(-) A-I      intronic chr14:99918039(-) A-I      intronic chr14:99918014(-) A-I      intronic chr14:99906218(-) A-I      intronic chr14:99922309(-) A-I      intronic chr14:99867393(-) A-I      intronic chr14:99909686(-) A-I      intronic chr14:99906221(-) A-I      intronic chr14:99909826(-) A-I      intronic chr14:99868892(-) A-I      intronic chr14:99909840(-) A-I      intronic chr14:99911089(-) A-I      intronic chr14:99911090(-) A-I      intronic chr14:99868891(-) A-I      intronic chr14:99920624(-) A-I      intronic chr14:99919965(-) A-I      intronic chr14:99920119(-) A-I      intronic chr14:99867336(-) A-I      intronic chr14:99868817(-) A-I      intronic chr14:99869025(-) A-I      intronic chr14:99894736(-) A-I      intronic chr14:99894899(-) A-I      intronic chr14:99920618(-) A-I      intronic chr14:99909695(-) A-I      intronic chr14:99920141(-) A-I      intronic chr14:99909758(-) A-I      intronic chr14:99894914(-) A-I      intronic chr14:99894939(-) A-I      intronic chr14:99894968(-) A-I      intronic chr14:99909862(-) A-I      intronic chr14:99900006(-) A-I      intronic chr14:99869065(-) A-I      intronic chr14:99920641(-) A-I      intronic chr14:99900025(-) A-I      intronic chr14:99910998(-) A-I      intronic chr14:99918620(-) A-I      intronic chr14:99868992(-) A-I      intronic chr14:99899913(-) A-I      intronic chr14:99938756(-) A-I      intronic chr14:99868874(-) A-I      intronic chr14:99899942(-) A-I      intronic chr14:99898005(-) A-I      intronic chr14:99911042(-) A-I      intronic chr14:99940626(-) A-I      intronic chr14:99922365(-) A-I      intronic chr14:99867364(-) A-I      intronic chr14:99922461(-) A-I      intronic chr14:99911150(-) A-I      intronic chr14:99917904(-) A-I      intronic chr14:99918645(-) A-I      intronic chr14:99867419(-) A-I      intronic chr14:99910952(-) A-I      intronic chr14:99909759(-) A-I      intronic chr14:99918068(-) A-I      intronic chr14:99867424(-) A-I      intronic chr14:99920691(-) A-I      intronic chr14:99894835(-) A-I      intronic chr14:99920144(-) A-I      intronic chr14:99925196(-) A-I      intronic chr14:99868987(-) A-I      intronic chr14:99906364(-) A-I      intronic chr14:99909685(-) A-I      intronic chr14:99911096(-) A-I      intronic chr14:99898031(-) A-I      intronic chr14:99918239(-) A-I      intronic chr14:99922381(-) A-I      intronic chr14:99899949(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SETD3	chr14:99864548-99864549(-) m6A 3'UTR       25456834//24981863 chr14:99864567-99864568(-) m6A 3'UTR       25456834//24981863//26404942//22608085 chr14:99864611-99864612(-) m6A 3'UTR       25456834//24981863//26404942//22608085 chr14:99864747-99864748(-) m6A 3'UTR       25456834//24981863//22608085 chr14:99864793-99864794(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr14:99864809-99864810(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr14:99864967-99864968(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr14:99865040-99865041(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085 chr14:99865113-99865114(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr14:99865130-99865131(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr14:99865190-99865191(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr14:99865226-99865227(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr14:99865253-99865254(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr14:99865439-99865440(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//22608085 chr14:99866446-99866447(-) m6A 3'UTR//CDS//exon       27773535//22608085 chr14:99866455-99866456(-) m6A 3'UTR//CDS//exon       27773535//22608085 chr14:99876469-99876470(-) m6A 3'UTR//intron       27773535 chr14:99876481-99876482(-) m6A 3'UTR//intron       27773535 chr14:99876508-99876509(-) m6A 3'UTR//intron       27773535 chr14:99880250-99880251(-) m6A 3'UTR//CDS//intron       26404942//27773535 chr14:99924655-99924656(-) m6A 3'UTR//CDS//exon       26404942//27773535 chr14:99924758-99924759(-) m6A 3'UTR//CDS//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SETD3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-3p
Interactor2: SETD3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg