Basic Information:

  VIRBase ID:  

VHID00412027

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-3p:  MIMAT0009205          RNF126:  NM_194460     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-3p	RNF126
miRBase Accession/Entrez ID	MIMAT0009205	55658
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RNF126	chr19:660002(-) A-I      intronic chr19:662153(-) A-I      intronic chr19:659902(-) A-I      intronic chr19:655127(-) A-I      intronic chr19:648812(-) A-I      intronic chr19:659888(-) A-I      intronic chr19:662101(-) A-I      intronic chr19:648857(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNF126	chr19:647590-647591(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:647603-647604(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:647608-647609(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:647637-647638(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr19:647986-647987(-) m6A 3'UTR//exon       24284625//24981863//27371828//27773536//22575960 chr19:648053-648054(-) m6A 3'UTR//exon       24284625//24981863//27371828//27773536//22575960 chr19:648221-648222(-) m6A 3'UTR//CDS//exon       24284625//27773535//22575960 chr19:648233-648234(-) m6A 3'UTR//CDS//exon       24284625//27773535//22575960 chr19:648238-648239(-) m6A 3'UTR//CDS//exon       24284625//27773535//22575960 chr19:648955-648956(-) m6A 3'UTR//CDS//exon       27773535 chr19:649078-649079(-) m6A exon//intron       27773535 chr19:649304-649305(-) m6A exon//intron       - chr19:649721-649722(-) m6A 3'UTR//CDS//exon       27773536 chr19:649730-649731(-) m6A 3'UTR//CDS//exon       27773536 chr19:650365-650366(-) m6A exon//intron       27773536 chr19:651709-651710(-) m6A 3'UTR//CDS//exon       24284625//27773536//22575960 chr19:651733-651734(-) m6A 3'UTR//CDS//exon       24284625//27773536//22575960 chr19:651813-651814(-) m6A 3'UTR//CDS//exon//intron       24284625//27773536 chr19:651847-651848(-) m6A 3'UTR//CDS//exon//intron       24284625//27773536 chr19:651902-651903(-) m6A CDS//intron       24284625//27773536 chr19:652254-652255(-) m6A CDS//exon       24284625//27773536 chr19:652395-652396(-) m6A exon//intron       - chr19:662838-662839(-) m6A intron       27773536 chr19:662861-662862(-) m6A intron       24209618//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RNF126	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-3p
Interactor2: RNF126

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg