Basic Information:

  VIRBase ID:  

VHID00411499

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-3p:  MIMAT0009205          PSMB7:  NM_002799     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-3p	PSMB7
miRBase Accession/Entrez ID	MIMAT0009205	5695
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Z

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PSMB7	chr9:127168139(-) A-I      intronic chr9:127168131(-) A-I      intronic chr9:127168126(-) A-I      intronic chr9:127169203(-) A-I      intronic chr9:127166939(-) A-I      intronic chr9:127166913(-) A-I      intronic chr9:127166396(-) A-I      intronic chr9:127166388(-) A-I      intronic chr9:127149519(-) A-I      intronic chr9:127149462(-) A-I      intronic chr9:127149358(-) A-I      intronic chr9:127149344(-) A-I      intronic chr9:127144724(-) A-I      intronic chr9:127144714(-) A-I      intronic chr9:127144711(-) A-I      intronic chr9:127144703(-) A-I      intronic chr9:127144583(-) A-I      intronic chr9:127144516(-) A-I      intronic chr9:127144405(-) A-I      intronic chr9:127144333(-) A-I      intronic chr9:127144321(-) A-I      intronic chr9:127144280(-) A-I      intronic chr9:127137656(-) A-I      intronic chr9:127137646(-) A-I      intronic chr9:127137644(-) A-I      intronic chr9:127137621(-) A-I      intronic chr9:127168237(-) A-I      intronic chr9:127137312(-) A-I      intronic chr9:127166463(-) A-I      intronic chr9:127168659(-) A-I      intronic chr9:127173488(-) A-I      intronic chr9:127170441(-) A-I      intronic chr9:127170318(-) A-I      intronic chr9:127170223(-) A-I      intronic chr9:127170221(-) A-I      intronic chr9:127170208(-) A-I      intronic chr9:127170205(-) A-I      intronic chr9:127172360(-) A-I      intronic chr9:127136907(-) A-I      intronic chr9:127144584(-) A-I      intronic chr9:127144381(-) A-I      intronic chr9:127166279(-) A-I      intronic chr9:127168100(-) A-I      intronic chr9:127144293(-) A-I      intronic chr9:127166263(-) A-I      intronic chr9:127144760(-) A-I      intronic chr9:127166377(-) A-I      intronic chr9:127168216(-) A-I      intronic chr9:127168610(-) A-I      intronic chr9:127172546(-) A-I      intronic chr9:127137715(-) A-I      intronic chr9:127144461(-) A-I      intronic chr9:127168537(-) A-I      intronic chr9:127137564(-) A-I      intronic chr9:127165769(-) A-I      intronic chr9:127168059(-) A-I      intronic chr9:127136995(-) A-I      intronic chr9:127173501(-) A-I      intronic chr9:127136921(-) A-I      intronic chr9:127166914(-) A-I      intronic chr9:127168699(-) A-I      intronic chr9:127169258(-) A-I      intronic chr9:127144645(-) A-I      intronic chr9:127144559(-) A-I      intronic chr9:127168142(-) A-I      intronic chr9:127144410(-) A-I      intronic chr9:127166303(-) A-I      intronic chr9:127168086(-) A-I      intronic chr9:127165682(-) A-I      intronic chr9:127137235(-) A-I      intronic chr9:127137578(-) A-I      intronic chr9:127168135(-) A-I      intronic chr9:127166309(-) A-I      intronic chr9:127144404(-) A-I      intronic chr9:127168681(-) A-I      intronic chr9:127166246(-) A-I      intronic chr9:127170196(-) A-I      intronic chr9:127144317(-) A-I      intronic chr9:127144320(-) A-I      intronic chr9:127169252(-) A-I      intronic chr9:127144326(-) A-I      intronic chr9:127144762(-) A-I      intronic chr9:127136869(-) A-I      intronic chr9:127144705(-) A-I      intronic chr9:127144294(-) A-I      intronic chr9:127168718(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PSMB7	chr9:127144293(-) A-I intron -    21960545 chr9:127144294(-) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PSMB7	chr9:127115760-127115761(-) m6A 3'UTR//exon       24284625//28052920//27773535 chr9:127115766-127115767(-) m6A 3'UTR//exon       24284625//28052920//27773535 chr9:127115783-127115784(-) m6A 3'UTR//exon       24284625//28052920//27773535 chr9:127115814-127115815(-) m6A 3'UTR//exon       24284625//28052920//27773535//22575960 chr9:127115886-127115887(-) m6A CDS//exon       24284625//28052920//27773535//22575960 chr9:127115893-127115894(-) m6A CDS//exon       24284625//27773535//22575960 chr9:127115902-127115903(-) m6A CDS//exon       24284625//26404942//27773535//22575960 chr9:127115959-127115960(-) m6A CDS//exon       24284625//26404942//22575960 chr9:127118901-127118902(-) m6A intron       24284625 chr9:127119046-127119047(-) m6A CDS//exon       27773535 chr9:127119093-127119094(-) m6A CDS//exon       27773535//22575960 chr9:127174738-127174739(-) m6A CDS//exon       26404942 chr9:127174744-127174745(-) m6A CDS//exon       26404942 chr9:127174754-127174755(-) m6A CDS//exon       26404942 chr9:127176222-127176223(-) m6A CDS//exon       26404942 chr9:127177152-127177153(-) m6A CDS//exon       26404942//22575960 chr9:127177720-127177721(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PSMB7	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-3p
Interactor2: PSMB7

Evidence Support:

Prediction-Evidence	PITA//RNAHybrid
Support Database	VmiReg