Basic Information:

  VIRBase ID:  

VHID00411136

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART4-3p:  MIMAT0009204          PLPP6:  NM_203453     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART4-3p	PLPP6
miRBase Accession/Entrez ID	MIMAT0009204	403313
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA6J24.6//PDP1//PPAPDC2//PSDP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLPP6	chr9:4662529-4662530(+) m6A CDS       25456834 chr9:4662643-4662644(+) m6A CDS       25456834//24981863//22608085 chr9:4662652-4662653(+) m6A CDS       25456834//24981863//22608085 chr9:4662658-4662659(+) m6A CDS       24284625//25456834//24981863//22608085 chr9:4662797-4662798(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr9:4662877-4662878(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr9:4662901-4662902(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr9:4662967-4662968(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr9:4662991-4662992(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr9:4663054-4663055(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr9:4663201-4663202(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr9:4663328-4663329(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:4663441-4663442(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr9:4663469-4663470(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr9:4663522-4663523(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4663537-4663538(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4663630-4663631(+) m6A 3'UTR       24981863//22608085 chr9:4663635-4663636(+) m6A 3'UTR       24981863//22608085 chr9:4663649-4663650(+) m6A 3'UTR       24981863//22608085 chr9:4663681-4663682(+) m6A 3'UTR       24981863//22608085 chr9:4663727-4663728(+) m6A 3'UTR       24981863//22608085 chr9:4663748-4663749(+) m6A 3'UTR       22608085 chr9:4664454-4664455(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4664527-4664528(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4664534-4664535(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4664553-4664554(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4664583-4664584(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4664710-4664711(+) m6A 3'UTR       24284625//24981863//22608085 chr9:4664738-4664739(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr9:4664821-4664822(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr9:4664904-4664905(+) m6A 3'UTR       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLPP6	Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART4-3p
Interactor2: PLPP6

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg