Basic Information:

  VIRBase ID:  

VHID00408608

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART4-3p:  MIMAT0009204          ITGA4:  NM_001316312     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART4-3p	ITGA4
miRBase Accession/Entrez ID	MIMAT0009204	3676
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD49D//IA4

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ITGA4	chr2:182355984(+) G-A intron -    22484847 chr2:182355985(+) C-A intron -    22484847 chr2:182395764(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ITGA4	chr2:182322086-182322087(+) m6A 5'UTR//exon       24981863 chr2:182322153-182322154(+) m6A 5'UTR//exon       24981863//27371828 chr2:182322270-182322271(+) m6A 5'UTR//exon       - chr2:182322404-182322405(+) m6A CDS//exon       - chr2:182322490-182322491(+) m6A CDS//exon       - chr2:182400175-182400176(+) m6A CDS       24981863//26404942//22608085 chr2:182400204-182400205(+) m6A CDS       24981863//26404942//22608085 chr2:182400213-182400214(+) m6A CDS       24981863//26404942//22608085 chr2:182400256-182400257(+) m6A 3'UTR       24981863//26404942//22608085 chr2:182400283-182400284(+) m6A 3'UTR       24981863//26404942//22608085 chr2:182400316-182400317(+) m6A 3'UTR       24981863//26404942//22608085 chr2:182400350-182400351(+) m6A 3'UTR       24209618//24981863//26404942//22608085 chr2:182400435-182400436(+) m6A 3'UTR       24981863//26404942//22608085 chr2:182400493-182400494(+) m6A 3'UTR       24981863//26404942//22608085 chr2:182400825-182400826(+) m6A 3'UTR       26404942 chr2:182400854-182400855(+) m6A 3'UTR       26404942 chr2:182400862-182400863(+) m6A 3'UTR       26404942 chr2:182400869-182400870(+) m6A 3'UTR       26404942 chr2:182400874-182400875(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ITGA4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART4-3p
Interactor2: ITGA4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg