Basic Information:

  VIRBase ID:  

VHID00406336

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-5p:  MIMAT0004836          G3BP1:  NM_005754     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART19-5p	G3BP1
miRBase Accession/Entrez ID	MIMAT0004836	10146
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	G3BP//HDH-VIII

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	G3BP1	chr5:151182223(+) A-I      intronic chr5:151182221(+) A-I      intronic chr5:151181521(+) A-I      intronic chr5:151183128(+) A-I      intronic chr5:151182283(+) A-I      intronic chr5:151172414(+) A-I      intronic chr5:151172799(+) A-I      intronic chr5:151182473(+) A-I      intronic chr5:151182439(+) A-I      intronic chr5:151182400(+) A-I      intronic chr5:151182392(+) A-I      intronic chr5:151182390(+) A-I      intronic chr5:151183182(+) A-I      intronic chr5:151171491(+) A-I      intronic chr5:151163069(+) A-I      intronic chr5:151163068(+) A-I      intronic chr5:151158471(+) A-I      intronic chr5:151181432(+) A-I      intronic chr5:151181462(+) A-I      intronic chr5:151182332(+) A-I      intronic chr5:151182476(+) A-I      intronic chr5:151158458(+) A-I      intronic chr5:151182331(+) A-I      intronic chr5:151182317(+) A-I      intronic chr5:151182307(+) A-I      intronic chr5:151182306(+) A-I      intronic chr5:151183335(+) A-I      intronic chr5:151183293(+) A-I      intronic chr5:151182240(+) A-I      intronic chr5:151183153(+) A-I      intronic chr5:151172294(+) A-I      intronic chr5:151182344(+) A-I      intronic chr5:151157169(+) A-I      intronic chr5:151172879(+) A-I      intronic chr5:151181395(+) A-I      intronic chr5:151158102(+) A-I      intronic chr5:151158144(+) A-I      intronic chr5:151158459(+) A-I      intronic chr5:151158460(+) A-I      intronic chr5:151158462(+) A-I      intronic chr5:151158160(+) A-I      intronic chr5:151158340(+) A-I      intronic chr5:151158385(+) A-I      intronic chr5:151181419(+) A-I      intronic chr5:151158456(+) A-I      intronic chr5:151172188(+) A-I      intronic chr5:151165807(+) A-I      intronic chr5:151171470(+) A-I      intronic chr5:151158498(+) A-I      intronic chr5:151158530(+) A-I      intronic chr5:151172307(+) A-I      intronic chr5:151181476(+) A-I      intronic chr5:151164688(+) A-I      intronic chr5:151173468(+) A-I      intronic chr5:151182987(+) A-I      intronic chr5:151173559(+) A-I      intronic chr5:151158120(+) A-I      intronic chr5:151182489(+) A-I      intronic chr5:151181505(+) A-I      intronic chr5:151172226(+) A-I      intronic chr5:151183184(+) A-I      intronic chr5:151188483(+) A-I      3'UTR chr5:151188488(+) A-I      3'UTR chr5:151186385(+) A-I      3'UTR chr5:151173460(+) A-I      intronic chr5:151174726(+) A-I      intronic chr5:151172891(+) A-I      intronic chr5:151172809(+) A-I      intronic chr5:151181583(+) A-I      intronic chr5:151182889(+) A-I      intronic chr5:151181640(+) A-I      intronic chr5:151172390(+) A-I      intronic chr5:151166427(+) A-I      intronic chr5:151162574(+) A-I      intronic chr5:151173454(+) A-I      intronic chr5:151173464(+) A-I      intronic chr5:151158453(+) A-I      intronic chr5:151165675(+) A-I      intronic chr5:151171420(+) A-I      intronic chr5:151182873(+) A-I      intronic chr5:151172385(+) A-I      intronic chr5:151174716(+) A-I      intronic chr5:151158515(+) A-I      intronic chr5:151158083(+) A-I      intronic chr5:151171447(+) A-I      intronic chr5:151165703(+) A-I      intronic chr5:151171317(+) A-I      intronic chr5:151158217(+) A-I      intronic chr5:151181584(+) A-I      intronic chr5:151172423(+) A-I      intronic chr5:151183110(+) A-I      intronic chr5:151181639(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	G3BP1	chr5:151168037(+) A-I intron -    15342557 chr5:151168361(+) A-I intron -    15342557 chr5:151168570(+) A-I intron -    15342557 chr5:151168794(+) A-I intron -    15342557   //15258596 chr5:151168802(+) A-I intron -    15342557   //15258596 chr5:151168808(+) A-I intron -    15342557   //15258596 chr5:151169120(+) A-I intron -    15342557 chr5:151169486(+) A-I intron -    15342557 chr5:151169513(+) A-I intron -    15342557 chr5:151172188(+) A-I intron -    21960545 chr5:151158120(+) A-G intron -    22484847 chr5:151158217(+) A-G intron -    22484847 chr5:151158356(+) A-G intron -    22484847 chr5:151158453(+) A-G intron -    22484847 chr5:151158456(+) A-G intron -    22484847 chr5:151158467(+) A-G intron -    22484847 chr5:151158515(+) A-G intron -    22484847 chr5:151165703(+) A-G intron -    22484847 chr5:151165774(+) T-C intron -    22484847 chr5:151165807(+) A-G intron -    22484847 chr5:151168175(+) A-G intron -    22484847 chr5:151168570(+) A-G intron -    22484847 chr5:151168763(+) A-G intron -    22484847 chr5:151168794(+) A-G intron -    22484847 chr5:151168882(+) A-G intron -    22484847 chr5:151169481(+) A-G intron -    22484847 chr5:151172188(+) A-G intron -    22484847 chr5:151172190(+) A-G intron -    22484847 chr5:151172307(+) A-G intron -    22484847 chr5:151173454(+) A-G intron -    22484847 chr5:151173468(+) A-G intron -    22484847 chr5:151174604(+) C-T intron -    22484847 chr5:151177816(+) T-C intron -    22484847 chr5:151181476(+) A-G intron -    22484847 chr5:151181578(+) A-G intron -    22484847 chr5:151181583(+) A-G intron -    22484847 chr5:151181584(+) A-G intron -    22484847 chr5:151182231(+) A-G intron -    22484847 chr5:151182260(+) C-T intron -    22484847 chr5:151182459(+) A-G intron -    22484847 chr5:151182889(+) A-G intron -    22484847 chr5:151183184(+) A-G intron -    22484847 chr5:151183245(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	G3BP1	chr5:151151492-151151493(+) m6A 5'UTR//intron       24981863 chr5:151152000-151152001(+) m6A 5'UTR//intron       - chr5:151166138-151166139(+) m6A 5'UTR//exon//intron       - chr5:151166231-151166232(+) m6A CDS//exon       - chr5:151166251-151166252(+) m6A CDS//exon       - chr5:151166263-151166264(+) m6A CDS//exon       - chr5:151166281-151166282(+) m6A exon//intron       - chr5:151176802-151176803(+) m6A 3'UTR//CDS       26404942 chr5:151176826-151176827(+) m6A 3'UTR//CDS       26404942 chr5:151176844-151176845(+) m6A 3'UTR//CDS       26404942 chr5:151176850-151176851(+) m6A 3'UTR//CDS       26404942 chr5:151176856-151176857(+) m6A 3'UTR//CDS       26404942 chr5:151176862-151176863(+) m6A 3'UTR//CDS       26404942 chr5:151176911-151176912(+) m6A 3'UTR//CDS       26404942 chr5:151179493-151179494(+) m6A 3'UTR//CDS       24981863//22575960 chr5:151179520-151179521(+) m6A 3'UTR//CDS       24981863//22575960 chr5:151179550-151179551(+) m6A 3'UTR//CDS       24981863//22575960 chr5:151179556-151179557(+) m6A 3'UTR//CDS       24981863//22575960 chr5:151179809-151179810(+) m6A 3'UTR//CDS       24981863 chr5:151179827-151179828(+) m6A 3'UTR//CDS       24981863 chr5:151183490-151183491(+) m1A 3'UTR//CDS       26863196 chr5:151183493-151183494(+) m6A 3'UTR//CDS       24209618//25456834//22575960 chr5:151183540-151183541(+) m6A 3'UTR//CDS       24209618//25456834//24981863//22575960 chr5:151183609-151183610(+) m6A 3'UTR//CDS       24209618//25456834//24981863//22575960 chr5:151183682-151183683(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr5:151183755-151183756(+) m6A 3'UTR       24284625//24209618//22575960 chr5:151183884-151183885(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr5:151183908-151183909(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr5:151183940-151183941(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr5:151184101-151184102(+) m6A 3'UTR       27773535 chr5:151184340-151184341(+) m6A 3'UTR       27773535 chr5:151190328-151190329(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART19-5p	Exosome B cell line (Raji)     21505438
	G3BP1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART19-5p
Interactor2: G3BP1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg