Basic Information:

  VIRBase ID:  

VHID00406278

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-5p:  MIMAT0004836          ATG13:  NR_144422     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART19-5p	ATG13
miRBase Accession/Entrez ID	MIMAT0004836	9776
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA0652//PARATARG8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATG13	chr11:46680639(+) A-I      intronic chr11:46674159(+) A-I      intronic chr11:46670104(+) A-I      intronic chr11:46670100(+) A-I      intronic chr11:46670096(+) A-I      intronic chr11:46670082(+) A-I      intronic chr11:46680189(+) A-I      intronic chr11:46648002(+) A-I      intronic chr11:46680185(+) A-I      intronic chr11:46680203(+) A-I      intronic chr11:46670170(+) A-I      intronic chr11:46647696(+) A-I      intronic chr11:46642787(+) A-I      intronic chr11:46660497(+) A-I      intronic chr11:46674123(+) A-I      intronic chr11:46640983(+) A-I      intronic chr11:46682879(+) A-I      intronic chr11:46647712(+) A-I      intronic chr11:46647767(+) A-I      intronic chr11:46682469(+) A-I      intronic chr11:46660389(+) A-I      intronic chr11:46674104(+) A-I      intronic chr11:46647770(+) A-I      intronic chr11:46648676(+) A-I      intronic chr11:46687484(+) A-I      intronic chr11:46680227(+) A-I      intronic chr11:46654845(+) A-I      intronic chr11:46654730(+) A-I      intronic chr11:46660499(+) A-I      intronic chr11:46655300(+) A-I      intronic chr11:46649613(+) A-I      intronic chr11:46648614(+) A-I      intronic chr11:46649553(+) A-I      intronic chr11:46680251(+) A-I      intronic chr11:46659758(+) A-I      intronic chr11:46649522(+) A-I      intronic chr11:46649478(+) A-I      intronic chr11:46649476(+) A-I      intronic chr11:46649470(+) A-I      intronic chr11:46655238(+) A-I      intronic chr11:46677551(+) A-I      intronic chr11:46649186(+) A-I      intronic chr11:46648844(+) A-I      intronic chr11:46680271(+) A-I      intronic chr11:46680295(+) A-I      intronic chr11:46648835(+) A-I      intronic chr11:46648778(+) A-I      intronic chr11:46648770(+) A-I      intronic chr11:46683338(+) A-I      intronic chr11:46648765(+) A-I      intronic chr11:46659787(+) A-I      intronic chr11:46646882(+) A-I      intronic chr11:46682880(+) A-I      intronic chr11:46647559(+) A-I      intronic chr11:46648729(+) A-I      intronic chr11:46648552(+) A-I      intronic chr11:46647935(+) A-I      intronic chr11:46647645(+) A-I      intronic chr11:46647687(+) A-I      intronic chr11:46660487(+) A-I      intronic chr11:46674103(+) A-I      intronic chr11:46661478(+) A-I      intronic chr11:46682111(+) A-I      intronic chr11:46661465(+) A-I      intronic chr11:46677388(+) A-I      intronic chr11:46672295(+) A-I      intronic chr11:46645077(+) A-I      intronic chr11:46682011(+) A-I      intronic chr11:46647690(+) A-I      intronic chr11:46680627(+) A-I      intronic chr11:46680346(+) A-I      intronic chr11:46648706(+) A-I      intronic chr11:46680320(+) A-I      intronic chr11:46680055(+) A-I      intronic chr11:46662106(+) A-I      intronic chr11:46649548(+) A-I      intronic chr11:46661473(+) A-I      intronic chr11:46649077(+) A-I      intronic chr11:46680582(+) A-I      intronic chr11:46674100(+) A-I      intronic chr11:46673677(+) A-I      intronic chr11:46642664(+) A-I      intronic chr11:46649303(+) A-I      intronic chr11:46673667(+) A-I      intronic chr11:46677352(+) A-I      intronic chr11:46654714(+) A-I      intronic chr11:46683301(+) A-I      intronic chr11:46645619(+) A-I      intronic chr11:46670180(+) A-I      intronic chr11:46641356(+) A-I      intronic chr11:46680306(+) A-I      intronic chr11:46682076(+) A-I      intronic chr11:46669096(+) A-I      intronic chr11:46673638(+) A-I      intronic chr11:46674196(+) A-I      intronic chr11:46673613(+) A-I      intronic chr11:46642748(+) A-I      intronic chr11:46674924(+) A-I      intronic chr11:46675285(+) A-I      intronic chr11:46675295(+) A-I      intronic chr11:46655214(+) A-I      intronic chr11:46676009(+) A-I      intronic chr11:46683290(+) A-I      intronic chr11:46669746(+) A-I      intronic chr11:46669745(+) A-I      intronic chr11:46676694(+) A-I      intronic chr11:46683322(+) A-I      intronic chr11:46661497(+) A-I      intronic chr11:46649289(+) A-I      intronic chr11:46677545(+) A-I      intronic chr11:46680186(+) A-I      intronic chr11:46680617(+) A-I      intronic chr11:46646368(+) A-I      intronic chr11:46662726(+) A-I      intronic chr11:46684736(+) A-I      intronic chr11:46649377(+) A-I      intronic chr11:46680672(+) A-I      intronic chr11:46641000(+) A-I      intronic chr11:46682865(+) A-I      intronic chr11:46682812(+) A-I      intronic chr11:46658551(+) A-I      intronic chr11:46679990(+) A-I      intronic chr11:46676064(+) A-I      intronic chr11:46658479(+) A-I      intronic chr11:46642232(+) A-I      intronic chr11:46676056(+) A-I      intronic chr11:46649767(+) A-I      intronic chr11:46679448(+) A-I      intronic chr11:46680269(+) A-I      intronic chr11:46659909(+) A-I      intronic chr11:46655310(+) A-I      intronic chr11:46649121(+) A-I      intronic chr11:46646444(+) A-I      intronic chr11:46656219(+) A-I      intronic chr11:46673602(+) A-I      intronic chr11:46644589(+) A-I      intronic chr11:46674083(+) A-I      intronic chr11:46658444(+) A-I      intronic chr11:46682534(+) A-I      intronic chr11:46677362(+) A-I      intronic chr11:46658459(+) A-I      intronic chr11:46640978(+) A-I      intronic chr11:46641015(+) A-I      intronic chr11:46646594(+) A-I      intronic chr11:46679443(+) A-I      intronic chr11:46680266(+) A-I      intronic chr11:46641531(+) A-I      intronic chr11:46641035(+) A-I      intronic chr11:46641119(+) A-I      intronic chr11:46641529(+) A-I      intronic chr11:46641743(+) A-I      intronic chr11:46641747(+) A-I      intronic chr11:46641773(+) A-I      intronic chr11:46641835(+) A-I      intronic chr11:46679512(+) A-I      intronic chr11:46642064(+) A-I      intronic chr11:46657853(+) A-I      intronic chr11:46657969(+) A-I      intronic chr11:46679540(+) A-I      intronic chr11:46642665(+) A-I      intronic chr11:46642695(+) A-I      intronic chr11:46675708(+) A-I      intronic chr11:46642794(+) A-I      intronic chr11:46642804(+) A-I      intronic chr11:46645009(+) A-I      intronic chr11:46645127(+) A-I      intronic chr11:46680116(+) A-I      intronic chr11:46645164(+) A-I      intronic chr11:46645742(+) A-I      intronic chr11:46680129(+) A-I      intronic chr11:46646430(+) A-I      intronic chr11:46646431(+) A-I      intronic chr11:46646617(+) A-I      intronic chr11:46659731(+) A-I      intronic chr11:46646631(+) A-I      intronic chr11:46657846(+) A-I      intronic chr11:46655340(+) A-I      intronic chr11:46654978(+) A-I      intronic chr11:46683122(+) A-I      intronic chr11:46654955(+) A-I      intronic chr11:46680136(+) A-I      intronic chr11:46682290(+) A-I      intronic chr11:46662723(+) A-I      intronic chr11:46658268(+) A-I      intronic chr11:46646401(+) A-I      intronic chr11:46641395(+) A-I      intronic chr11:46680599(+) A-I      intronic chr11:46641118(+) A-I      intronic chr11:46670150(+) A-I      intronic chr11:46642745(+) A-I      intronic chr11:46659108(+) A-I      intronic chr11:46677339(+) A-I      intronic chr11:46642150(+) A-I      intronic chr11:46680036(+) A-I      intronic chr11:46641100(+) A-I      intronic chr11:46671646(+) A-I      intronic chr11:46641368(+) A-I      intronic chr11:46687236(+) A-I      intronic chr11:46642825(+) A-I      intronic chr11:46684566(+) A-I      intronic chr11:46654493(+) A-I      intronic chr11:46682424(+) A-I      intronic chr11:46674191(+) A-I      intronic chr11:46676165(+) A-I      intronic chr11:46680538(+) A-I      intronic chr11:46661507(+) A-I      intronic chr11:46641117(+) A-I      intronic chr11:46649090(+) A-I      intronic chr11:46646647(+) A-I      intronic chr11:46674145(+) A-I      intronic chr11:46682433(+) A-I      intronic chr11:46658476(+) A-I      intronic chr11:46658407(+) A-I      intronic chr11:46654441(+) A-I      intronic chr11:46649450(+) A-I      intronic chr11:46674823(+) A-I      intronic chr11:46670247(+) A-I      intronic chr11:46644765(+) A-I      intronic chr11:46682961(+) A-I      intronic chr11:46659785(+) A-I      intronic chr11:46682931(+) A-I      intronic chr11:46641114(+) A-I      intronic chr11:46649120(+) A-I      intronic chr11:46683217(+) A-I      intronic chr11:46655264(+) A-I      intronic chr11:46682948(+) A-I      intronic chr11:46659748(+) A-I      intronic chr11:46642149(+) A-I      intronic chr11:46641413(+) A-I      intronic chr11:46659808(+) A-I      intronic chr11:46646636(+) A-I      intronic chr11:46658539(+) A-I      intronic chr11:46655263(+) A-I      intronic chr11:46642167(+) A-I      intronic chr11:46670109(+) A-I      intronic chr11:46687619(+) A-I      intronic chr11:46682298(+) A-I      intronic chr11:46644794(+) A-I      intronic chr11:46645700(+) A-I      intronic chr11:46659932(+) A-I      intronic chr11:46682676(+) A-I      intronic chr11:46654701(+) A-I      intronic chr11:46676393(+) A-I      intronic chr11:46673544(+) A-I      intronic chr11:46682100(+) A-I      intronic chr11:46669763(+) A-I      intronic chr11:46648675(+) A-I      intronic chr11:46646982(+) A-I      intronic chr11:46658345(+) A-I      intronic chr11:46658373(+) A-I      intronic chr11:46683173(+) A-I      intronic chr11:46682916(+) A-I      intronic chr11:46641014(+) A-I      intronic chr11:46693293(+) A-I      intronic chr11:46653323(+) A-I      intronic chr11:46654679(+) A-I      intronic chr11:46679988(+) A-I      intronic chr11:46657010(+) A-I      intronic chr11:46677554(+) A-I      intronic chr11:46680607(+) A-I      intronic chr11:46670239(+) A-I      intronic chr11:46683109(+) A-I      intronic chr11:46657924(+) A-I      intronic chr11:46662181(+) A-I      intronic chr11:46676528(+) A-I      intronic chr11:46680638(+) A-I      intronic chr11:46646374(+) A-I      intronic chr11:46641524(+) A-I      intronic chr11:46649386(+) A-I      intronic chr11:46673678(+) A-I      intronic chr11:46682376(+) A-I      intronic chr11:46649867(+) A-I      intronic chr11:46682085(+) A-I      intronic chr11:46682813(+) A-I      intronic chr11:46660667(+) A-I      intronic chr11:46649160(+) A-I      intronic chr11:46659732(+) A-I      intronic chr11:46682655(+) A-I      intronic chr11:46648808(+) A-I      intronic chr11:46680348(+) A-I      intronic chr11:46641139(+) A-I      intronic chr11:46654692(+) A-I      intronic chr11:46662122(+) A-I      intronic chr11:46680558(+) A-I      intronic chr11:46672428(+) A-I      intronic chr11:46648809(+) A-I      intronic chr11:46644717(+) A-I      intronic chr11:46648606(+) A-I      intronic chr11:46649777(+) A-I      intronic chr11:46655324(+) A-I      intronic chr11:46674852(+) A-I      intronic chr11:46641325(+) A-I      intronic chr11:46673615(+) A-I      intronic chr11:46659864(+) A-I      intronic chr11:46676515(+) A-I      intronic chr11:46682980(+) A-I      intronic chr11:46680591(+) A-I      intronic chr11:46642837(+) A-I      intronic chr11:46676125(+) A-I      intronic chr11:46680252(+) A-I      intronic chr11:46648612(+) A-I      intronic chr11:46646911(+) A-I      intronic chr11:46644729(+) A-I      intronic chr11:46647053(+) A-I      intronic chr11:46645754(+) A-I      intronic chr11:46682634(+) A-I      intronic chr11:46659777(+) A-I      intronic chr11:46647019(+) A-I      intronic chr11:46649383(+) A-I      intronic chr11:46645743(+) A-I      intronic chr11:46682902(+) A-I      intronic chr11:46669785(+) A-I      intronic chr11:46641684(+) A-I      intronic chr11:46644733(+) A-I      intronic chr11:46642142(+) A-I      intronic chr11:46644789(+) A-I      intronic chr11:46641324(+) A-I      intronic chr11:46649518(+) A-I      intronic chr11:46649685(+) A-I      intronic chr11:46687380(+) A-I      intronic chr11:46659867(+) A-I      intronic chr11:46641481(+) A-I      intronic chr11:46649263(+) A-I      intronic chr11:46646692(+) A-I      intronic chr11:46648625(+) A-I      intronic chr11:46670149(+) A-I      intronic chr11:46687232(+) A-I      intronic chr11:46682040(+) A-I      intronic chr11:46687562(+) A-I      intronic chr11:46649872(+) A-I      intronic chr11:46642168(+) A-I      intronic chr11:46682599(+) A-I      intronic chr11:46682921(+) A-I      intronic chr11:46682907(+) A-I      intronic chr11:46646429(+) A-I      intronic chr11:46657987(+) A-I      intronic chr11:46648782(+) A-I      intronic chr11:46682371(+) A-I      intronic chr11:46642645(+) A-I      intronic chr11:46645078(+) A-I      intronic chr11:46669750(+) A-I      intronic chr11:46680215(+) A-I      intronic chr11:46676522(+) A-I      intronic chr11:46657839(+) A-I      intronic chr11:46642097(+) A-I      intronic chr11:46641721(+) A-I      intronic chr11:46658269(+) A-I      intronic chr11:46684669(+) A-I      intronic chr11:46646644(+) A-I      intronic chr11:46680349(+) A-I      intronic chr11:46662659(+) A-I      intronic chr11:46682911(+) A-I      intronic chr11:46652536(+) A-I      intronic chr11:46641181(+) A-I      intronic chr11:46675965(+) A-I      intronic chr11:46651593(+) A-I      intronic chr11:46680307(+) A-I      intronic chr11:46683316(+) A-I      intronic chr11:46680030(+) A-I      intronic chr11:46652792(+) A-I      intronic chr11:46648580(+) A-I      intronic chr11:46680225(+) A-I      intronic chr11:46641200(+) A-I      intronic chr11:46650570(+) A-I      intronic chr11:46645805(+) A-I      intronic chr11:46648604(+) A-I      intronic chr11:46680187(+) A-I      intronic chr11:46651637(+) A-I      5'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ATG13	chr11:46657987(+) A-G intron -    22484847 chr11:46658373(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATG13	chr11:46639125-46639126(+) m6A 5'UTR//exon       24284625//24981863//22608085 chr11:46639129-46639130(+) m6A 5'UTR//exon       24284625//24981863 chr11:46639286-46639287(+) m6A 5'UTR//exon       24981863 chr11:46678652-46678653(+) m6A CDS//exon       - chr11:46678667-46678668(+) m6A CDS//exon       - chr11:46678769-46678770(+) m6A exon//intron       - chr11:46693870-46693871(+) m6A CDS       - chr11:46694014-46694015(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr11:46694036-46694037(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr11:46694047-46694048(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr11:46694088-46694089(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr11:46694118-46694119(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr11:46694332-46694333(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr11:46694479-46694480(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr11:46694487-46694488(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr11:46694664-46694665(+) m6A 3'UTR//exon       24284625 chr11:46694694-46694695(+) m6A 3'UTR//exon       24284625//24981863 chr11:46694776-46694777(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr11:46694840-46694841(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr11:46694904-46694905(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr11:46695500-46695501(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr11:46695606-46695607(+) m6A 3'UTR//intron       24284625//25456834 chr11:46695874-46695875(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr11:46695901-46695902(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr11:46695925-46695926(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr11:46695935-46695936(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART19-5p	Exosome B cell line (Raji)     21505438
	ATG13	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART19-5p
Interactor2: ATG13

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg