Basic Information:

  VIRBase ID:  

VHID00404857

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART18-3p:  MIMAT0004835          NDFIP2:  NM_001161407     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART18-3p	NDFIP2
miRBase Accession/Entrez ID	MIMAT0004835	54602
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	N4WBP5A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NDFIP2	chr13:80111372(+) A-I      intronic chr13:80111294(+) A-I      intronic chr13:80111382(+) A-I      intronic chr13:80104472(+) A-I      intronic chr13:80111274(+) A-I      intronic chr13:80102152(+) A-I      intronic chr13:80110975(+) A-I      intronic chr13:80112812(+) A-I      intronic chr13:80111446(+) A-I      intronic chr13:80111032(+) A-I      intronic chr13:80111301(+) A-I      intronic chr13:80111430(+) A-I      intronic chr13:80102141(+) A-I      intronic chr13:80102219(+) A-I      intronic chr13:80111042(+) A-I      intronic chr13:80113268(+) A-I      intronic chr13:80120131(+) A-I      intronic chr13:80058337(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NDFIP2	chr13:80055425-80055426(+) m6A CDS       24981863 chr13:80055495-80055496(+) m6A CDS       24981863 chr13:80055582-80055583(+) m6A CDS       24981863//22575960 chr13:80055641-80055642(+) m6A CDS       24981863//22575960 chr13:80093163-80093164(+) m6A exon//intron       - chr13:80126709-80126710(+) m6A 3'UTR       27773535 chr13:80126729-80126730(+) m6A 3'UTR       27773535 chr13:80128649-80128650(+) Y 3'UTR       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NDFIP2	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART18-3p	Panobinostat       6918837 Topotecan       60700 l-685,458       5479543 Paclitaxel       36314 Sorafenib       216239 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART18-3p
Interactor2: NDFIP2

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg