Detail Information

Basic Information:


  VIRBase ID:  

VHID00404313

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-5p:           KLRG2:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART13-5p KLRG2
miRBase
Accession/Entrez ID
MIMAT0004818 346689
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CLEC15B

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KLRG2
chr7:139163926(-) A-I      intronic
chr7:139155320(-) A-I      intronic
chr7:139163002(-) A-I      intronic
chr7:139144565(-) A-I      intronic
chr7:139164056(-) A-I      intronic
chr7:139144570(-) A-I      intronic
chr7:139154902(-) A-I      intronic
chr7:139163012(-) A-I      intronic
chr7:139145517(-) A-I      intronic
chr7:139156325(-) A-I      intronic
chr7:139144636(-) A-I      intronic
chr7:139144609(-) A-I      intronic
chr7:139159061(-) A-I      intronic
chr7:139162990(-) A-I      intronic
chr7:139162996(-) A-I      intronic
chr7:139163000(-) A-I      intronic
chr7:139164083(-) A-I      intronic
chr7:139163914(-) A-I      intronic
chr7:139163918(-) A-I      intronic
chr7:139155486(-) A-I      intronic
chr7:139167227(-) A-I      intronic
chr7:139158901(-) A-I      intronic
chr7:139163334(-) A-I      intronic
chr7:139155727(-) A-I      intronic
chr7:139162950(-) A-I      intronic
chr7:139155308(-) A-I      intronic
chr7:139167201(-) A-I      intronic
chr7:139155451(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KLRG2
chr7:139137478-139137479(-) m6A 3'UTR       25456834
chr7:139137653-139137654(-) m6A 3'UTR       25456834//27773535//27773536//22608085
chr7:139137667-139137668(-) m6A 3'UTR       25456834//27773535//27773536//22608085
chr7:139137739-139137740(-) m6A 3'UTR       25456834//27773535//27773536//22608085
chr7:139137856-139137857(-) m6A 3'UTR       25456834//27773535//22608085
chr7:139137916-139137917(-) m6A 3'UTR       25456834//24981863//27773535//22608085
chr7:139138002-139138003(-) m6A 3'UTR       25456834//24981863//22608085
chr7:139138178-139138179(-) m6A 3'UTR       25456834//24981863//22608085
chr7:139138241-139138242(-) m6A 3'UTR       25456834//22608085
chr7:139138340-139138341(-) m6A CDS       25456834//24981863//27773536//22608085
chr7:139138362-139138363(-) m6A CDS       25456834//27773536//22608085
chr7:139138378-139138379(-) m6A CDS       25456834//27773536//22608085
chr7:139138432-139138433(-) m6A CDS       25456834//27773536
chr7:139167891-139167892(-) m6A CDS       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KLRG2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART13-5p
Interactor2: KLRG2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

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