Basic Information:

  VIRBase ID:  

VHID00404280

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-5p:  MIMAT0004818          ENDOV:  NR_148043     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-5p	ENDOV
miRBase Accession/Entrez ID	MIMAT0004818	284131
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ENDOV	chr17:78392722(+) A-I      intronic chr17:78409690(+) A-I      intronic chr17:78409740(+) A-I      intronic chr17:78408550(+) A-I      intronic chr17:78408626(+) A-I      intronic chr17:78394686(+) A-I      intronic chr17:78392784(+) A-I      intronic chr17:78390681(+) A-I      intronic chr17:78392794(+) A-I      intronic chr17:78390721(+) A-I      intronic chr17:78409676(+) A-I      intronic chr17:78394604(+) A-I      intronic chr17:78394595(+) A-I      intronic chr17:78394577(+) A-I      intronic chr17:78409802(+) A-I      intronic chr17:78409764(+) A-I      intronic chr17:78409752(+) A-I      intronic chr17:78409623(+) A-I      intronic chr17:78408517(+) A-I      intronic chr17:78408560(+) A-I      intronic chr17:78389791(+) A-I      intronic chr17:78389858(+) A-I      intronic chr17:78389862(+) A-I      intronic chr17:78389882(+) A-I      intronic chr17:78390033(+) A-I      intronic chr17:78408600(+) A-I      intronic chr17:78390605(+) A-I      intronic chr17:78390691(+) A-I      intronic chr17:78390764(+) A-I      intronic chr17:78390839(+) A-I      intronic chr17:78392752(+) A-I      intronic chr17:78392760(+) A-I      intronic chr17:78392793(+) A-I      intronic chr17:78392822(+) A-I      intronic chr17:78392834(+) A-I      intronic chr17:78392862(+) A-I      intronic chr17:78394557(+) A-I      intronic chr17:78408603(+) A-I      intronic chr17:78408661(+) A-I      intronic chr17:78408491(+) A-I      intronic chr17:78394630(+) A-I      intronic chr17:78408496(+) A-I      intronic chr17:78409556(+) A-I      intronic chr17:78390599(+) A-I      intronic chr17:78390738(+) A-I      intronic chr17:78389854(+) A-I      intronic chr17:78408635(+) A-I      intronic chr17:78409790(+) A-I      intronic chr17:78392852(+) A-I      intronic chr17:78389885(+) A-I      intronic chr17:78389782(+) A-I      intronic chr17:78390816(+) A-I      intronic chr17:78409738(+) A-I      intronic chr17:78389799(+) A-I      intronic chr17:78389946(+) A-I      intronic chr17:78389788(+) A-I      intronic chr17:78390643(+) A-I      intronic chr17:78390740(+) A-I      intronic chr17:78409777(+) A-I      intronic chr17:78389887(+) A-I      intronic chr17:78389880(+) A-I      intronic chr17:78408623(+) A-I      intronic chr17:78394661(+) A-I      intronic chr17:78408625(+) A-I      intronic chr17:78394657(+) A-I      intronic chr17:78408490(+) A-I      intronic chr17:78389861(+) A-I      intronic chr17:78390776(+) A-I      intronic chr17:78389890(+) A-I      intronic chr17:78389873(+) A-I      intronic chr17:78390684(+) A-I      intronic chr17:78389823(+) A-I      intronic chr17:78390824(+) A-I      intronic chr17:78409789(+) A-I      intronic chr17:78398500(+) A-I      intronic chr17:78392716(+) A-I      intronic chr17:78390613(+) A-I      intronic chr17:78392700(+) A-I      intronic chr17:78400344(+) A-I      intronic chr17:78390658(+) A-I      intronic chr17:78408559(+) A-I      intronic chr17:78394581(+) A-I      intronic chr17:78389886(+) A-I      intronic chr17:78394738(+) A-I      intronic chr17:78408599(+) A-I      intronic chr17:78389852(+) A-I      intronic chr17:78409776(+) A-I      intronic chr17:78396706(+) A-I      intronic chr17:78390829(+) A-I      intronic chr17:78409329(+) A-I      intronic chr17:78389958(+) A-I      intronic chr17:78390817(+) A-I      intronic chr17:78389916(+) A-I      intronic chr17:78394607(+) A-I      intronic chr17:78390644(+) A-I      intronic chr17:78389926(+) A-I      intronic chr17:78389933(+) A-I      intronic chr17:78390744(+) A-I      intronic chr17:78389876(+) A-I      intronic chr17:78389851(+) A-I      intronic chr17:78389922(+) A-I      intronic chr17:78390703(+) A-I      intronic chr17:78409692(+) A-I      intronic chr17:78409739(+) A-I      intronic chr17:78408665(+) A-I      intronic chr17:78390611(+) A-I      intronic chr17:78390789(+) A-I      intronic chr17:78390670(+) A-I      intronic chr17:78390600(+) A-I      intronic chr17:78409760(+) A-I      intronic chr17:78394677(+) A-I      intronic chr17:78390694(+) A-I      intronic chr17:78389842(+) A-I      intronic chr17:78390688(+) A-I      intronic chr17:78390790(+) A-I      intronic chr17:78389774(+) A-I      intronic chr17:78394578(+) A-I      intronic chr17:78408482(+) A-I      intronic chr17:78406788(+) A-I      intronic chr17:78389917(+) A-I      intronic chr17:78408564(+) A-I      intronic chr17:78392717(+) A-I      intronic chr17:78394750(+) A-I      intronic chr17:78394617(+) A-I      intronic chr17:78409829(+) A-I      intronic chr17:78408507(+) A-I      intronic chr17:78389910(+) A-I      intronic chr17:78390847(+) A-I      intronic chr17:78390729(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ENDOV	chr17:78389782(+) A-G intron -    22484847 chr17:78389916(+) A-G intron -    22484847 chr17:78389917(+) A-G intron -    22484847 chr17:78390599(+) A-G intron -    22484847 chr17:78390644(+) A-G intron -    22484847 chr17:78390829(+) A-G intron -    22484847 chr17:78392700(+) A-G intron -    22484847 chr17:78394578(+) A-G intron -    22484847 chr17:78394607(+) A-G intron -    22484847 chr17:78394617(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ENDOV	chr17:78389162-78389163(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr17:78389352-78389353(+) m6A 5'UTR//exon//intron       - chr17:78389481-78389482(+) m6A 5'UTR//CDS//exon//intron       25456834 chr17:78389487-78389488(+) m6A 5'UTR//CDS//exon//intron       25456834 chr17:78389508-78389509(+) m6A 5'UTR//CDS//exon//intron       25456834 chr17:78389568-78389569(+) m6A 5'UTR//CDS//exon//intron       - chr17:78391480-78391481(+) m6A exon//intron       24284625 chr17:78391494-78391495(+) m6A exon//intron       24284625 chr17:78391536-78391537(+) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:78391565-78391566(+) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:78391582-78391583(+) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:78391627-78391628(+) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:78391659-78391660(+) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr17:78392343-78392344(+) m6A exon//intron       24284625//25456834 chr17:78392362-78392363(+) m6A exon//intron       24284625//25456834 chr17:78392400-78392401(+) m6A exon//intron       25456834//24981863 chr17:78392438-78392439(+) m6A exon//intron       25456834//24981863 chr17:78392465-78392466(+) m6A exon//intron       25456834//24981863 chr17:78398877-78398878(+) m6A 3'UTR//5'UTR//CDS//intron       - chr17:78398885-78398886(+) m6A 3'UTR//5'UTR//CDS//intron       - chr17:78399266-78399267(+) m6A CDS//intron       - chr17:78402268-78402269(+) m6A exon//intron       - chr17:78402436-78402437(+) m6A 3'UTR//CDS//intron       - chr17:78403613-78403614(+) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27371828//22608085 chr17:78403652-78403653(+) m6A CDS//intron       24284625//25456834//24981863//27371828//22575960//22608085 chr17:78403672-78403673(+) m6A CDS//intron       24284625//25456834//24981863//27371828//22575960//22608085 chr17:78403712-78403713(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr17:78403729-78403730(+) m6A 3'UTR//intron       24284625//25456834//24981863//22575960//22608085 chr17:78403745-78403746(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr17:78403782-78403783(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr17:78403812-78403813(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr17:78403822-78403823(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr17:78403862-78403863(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22608085 chr17:78403988-78403989(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr17:78404059-78404060(+) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr17:78404124-78404125(+) m6A 3'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ENDOV	Exosome Blood     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-5p
Interactor2: ENDOV

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg