Basic Information:

  VIRBase ID:  

VHID00404265

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-5p:  MIMAT0004818          C2orf72:  NM_001144994     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-5p	C2orf72
miRBase Accession/Entrez ID	MIMAT0004818	257407
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C2orf72	chr2:231910314(+) A-I      intronic chr2:231910338(+) A-I      intronic chr2:231909959(+) A-I      intronic chr2:231909974(+) A-I      intronic chr2:231909958(+) A-I      intronic chr2:231909939(+) A-I      intronic chr2:231909792(+) A-I      intronic chr2:231907456(+) A-I      intronic chr2:231910256(+) A-I      intronic chr2:231910252(+) A-I      intronic chr2:231910826(+) A-I      intronic chr2:231909858(+) A-I      intronic chr2:231909868(+) A-I      intronic chr2:231909859(+) A-I      intronic chr2:231909885(+) A-I      intronic chr2:231907465(+) A-I      intronic chr2:231910263(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C2orf72	chr2:231906088-231906089(+) m6A CDS//exon       24981863 chr2:231911599-231911600(+) m6A CDS//exon       24981863 chr2:231911609-231911610(+) m6A CDS//exon       24981863 chr2:231911653-231911654(+) m6A CDS//exon       24981863//22608085 chr2:231911725-231911726(+) m6A CDS//exon       25456834//24981863//22608085 chr2:231911743-231911744(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911775-231911776(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911820-231911821(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911829-231911830(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911874-231911875(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911892-231911893(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911901-231911902(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911908-231911909(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231911926-231911927(+) m6A 3'UTR//exon       24981863//22608085 chr2:231912010-231912011(+) m6A 3'UTR//exon       24981863 chr2:231912121-231912122(+) m6A 3'UTR//exon       24981863 chr2:231912128-231912129(+) m6A 3'UTR//exon       24981863 chr2:231912162-231912163(+) m6A 3'UTR//exon       24981863 chr2:231912232-231912233(+) m6A 3'UTR//exon       24981863 chr2:231912344-231912345(+) m6A 3'UTR//exon       24981863 chr2:231912400-231912401(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231912470-231912471(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231912501-231912502(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:231912567-231912568(+) m6A 3'UTR//exon       24981863//22608085 chr2:231912595-231912596(+) m6A 3'UTR//exon       24981863//22608085 chr2:231912687-231912688(+) m6A 3'UTR//exon       24981863 chr2:231912711-231912712(+) m6A 3'UTR//exon       24981863 chr2:231912726-231912727(+) m6A 3'UTR//exon       24981863 chr2:231914112-231914113(+) m6A 3'UTR//exon       25456834//24981863//27773535 chr2:231914138-231914139(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085 chr2:231914163-231914164(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085 chr2:231914195-231914196(+) m6A 3'UTR//exon       25456834//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C2orf72	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-5p
Interactor2: C2orf72

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg