Basic Information:

  VIRBase ID:  

VHID00404085

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-5p:  MIMAT0004818          EMILIN3:  NM_052846     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-5p	EMILIN3
miRBase Accession/Entrez ID	MIMAT0004818	90187
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf130//dJ620E11.4//EMILIN5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EMILIN3	chr20:39988678-39988679(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr20:39988788-39988789(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr20:39988833-39988834(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr20:39988844-39988845(-) m6A 3'UTR       25456834 chr20:39988894-39988895(-) m6A 3'UTR       - chr20:39989117-39989118(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr20:39989156-39989157(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr20:39989223-39989224(-) m6A 3'UTR       25456834//24981863//22608085 chr20:39989237-39989238(-) m6A 3'UTR       25456834//24981863//22608085 chr20:39989242-39989243(-) m6A 3'UTR       25456834//24981863//22608085 chr20:39989287-39989288(-) m6A 3'UTR       25456834//24981863//22608085 chr20:39989294-39989295(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989335-39989336(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989369-39989370(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989486-39989487(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989528-39989529(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989568-39989569(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989620-39989621(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989664-39989665(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989707-39989708(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989717-39989718(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989722-39989723(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989744-39989745(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989861-39989862(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989892-39989893(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989906-39989907(-) m6A 3'UTR       25456834//24981863//27773536//22608085 chr20:39989956-39989957(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39989986-39989987(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990022-39990023(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990076-39990077(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990147-39990148(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990165-39990166(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990178-39990179(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990250-39990251(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990433-39990434(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990498-39990499(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990616-39990617(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990653-39990654(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990695-39990696(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990806-39990807(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990838-39990839(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990875-39990876(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39990986-39990987(-) m6A CDS       25456834//27773536//22608085 chr20:39991294-39991295(-) m6A CDS       25456834//24981863//27773536//22608085 chr20:39991399-39991400(-) m6A CDS       25456834//27773536//22608085 chr20:39991418-39991419(-) m6A CDS       25456834//27773536//22608085 chr20:39991495-39991496(-) m6A CDS       25456834 chr20:39992327-39992328(-) m6A CDS       27773536 chr20:39992387-39992388(-) m6A CDS       27773536 chr20:39995324-39995325(-) m6A 5'UTR       27773536 chr20:39995368-39995369(-) m6A 5'UTR       27773536 chr20:39995382-39995383(-) m6A 5'UTR       27773536 chr20:39995390-39995391(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EMILIN3	Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-5p
Interactor2: EMILIN3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg