Basic Information:

  VIRBase ID:  

VHID00404074

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-5p:  MIMAT0004818          KIAA1755:  NR_145960     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-5p	KIAA1755
miRBase Accession/Entrez ID	MIMAT0004818	85449
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KIAA1755	chr20:36842533(-) A-I      intronic chr20:36840548(-) A-I      3'UTR chr20:36840617(-) A-I      3'UTR chr20:36840459(-) A-I      3'UTR chr20:36840544(-) A-I      3'UTR chr20:36885834(-) A-I      intronic chr20:36882460(-) A-I      intronic chr20:36885900(-) A-I      intronic chr20:36884989(-) A-I      intronic chr20:36880035(-) A-I      intronic chr20:36842482(-) A-I      intronic chr20:36877257(-) A-I      intronic chr20:36883503(-) A-I      intronic chr20:36880240(-) A-I      intronic chr20:36840701(-) A-I      3'UTR chr20:36840630(-) A-I      3'UTR chr20:36840461(-) A-I      3'UTR chr20:36840474(-) A-I      3'UTR chr20:36840500(-) A-I      3'UTR chr20:36840622(-) A-I      3'UTR chr20:36840778(-) A-I      3'UTR chr20:36840507(-) A-I      3'UTR chr20:36882453(-) A-I      intronic chr20:36885089(-) A-I      intronic chr20:36882324(-) A-I      intronic chr20:36880105(-) A-I      intronic chr20:36883043(-) A-I      intronic chr20:36884988(-) A-I      intronic chr20:36883439(-) A-I      intronic chr20:36882314(-) A-I      intronic chr20:36842531(-) A-I      intronic chr20:36886485(-) A-I      intronic chr20:36842465(-) A-I      intronic chr20:36886466(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	KIAA1755	chr20:36852517(-) A-I intron -    15342557 chr20:36852542(-) A-I intron -    15342557 chr20:36852556(-) A-I intron -    15342557 chr20:36852557(-) A-I intron -    15342557 chr20:36852569(-) A-I intron -    15342557 chr20:36853517(-) A-I intron -    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KIAA1755	chr20:36841466-36841467(-) m6A CDS//exon       24981863 chr20:36841477-36841478(-) m6A CDS//exon       24981863 chr20:36841490-36841491(-) m6A CDS//exon       24981863 chr20:36841502-36841503(-) m6A CDS//exon       - chr20:36841688-36841689(-) m6A CDS//exon       24209618//24981863 chr20:36841693-36841694(-) m6A CDS//exon       24209618//24981863 chr20:36841698-36841699(-) m6A CDS//exon       24209618//24981863 chr20:36841744-36841745(-) m6A CDS//exon       24209618//24981863 chr20:36841759-36841760(-) m6A CDS//exon       24209618//24981863 chr20:36846519-36846520(-) m6A exon//intron       24209618 chr20:36846530-36846531(-) m6A exon//intron       24209618 chr20:36854139-36854140(-) m6A CDS//intron       24209618 chr20:36855572-36855573(-) m6A CDS       24209618 chr20:36856593-36856594(-) m6A CDS       24209618 chr20:36869153-36869154(-) m6A CDS       24981863 chr20:36869315-36869316(-) m6A CDS       - chr20:36869326-36869327(-) m6A CDS       - chr20:36869387-36869388(-) m6A CDS       24981863 chr20:36869545-36869546(-) m6A CDS       24981863 chr20:36869592-36869593(-) m6A CDS       24981863 chr20:36869601-36869602(-) m6A CDS       24981863 chr20:36869711-36869712(-) m6A CDS       25456834//24981863 chr20:36869723-36869724(-) m6A CDS       25456834//24981863 chr20:36869791-36869792(-) m6A CDS       24981863 chr20:36869814-36869815(-) m6A CDS       24981863 chr20:36869861-36869862(-) m6A CDS       24981863 chr20:36869962-36869963(-) m6A CDS       24981863 chr20:36869997-36869998(-) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KIAA1755	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-5p
Interactor2: KIAA1755

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg