Detail Information

Basic Information:


  VIRBase ID:  

VHID00403902

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-5p:           WIZ:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART13-5p WIZ
miRBase
Accession/Entrez ID		 MIMAT0004818 58525
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - ZNF803

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED WIZ
chr19:15540397(-) A-T intron -    21725310

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase WIZ
chr19:15533244-15533245(-) Y 3'UTR       26075521
chr19:15533414-15533415(-) m6A 3'UTR       24284625//27773535
chr19:15533425-15533426(-) m6A 3'UTR       24284625//27773535
chr19:15533432-15533433(-) m6A 3'UTR       24284625//27773535
chr19:15533457-15533458(-) m6A 3'UTR       24284625//27773535
chr19:15533517-15533518(-) m6A 3'UTR       24284625//27773535
chr19:15533526-15533527(-) m6A 3'UTR       24284625//24981863//27773535
chr19:15533589-15533590(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr19:15533690-15533691(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr19:15533768-15533769(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828
chr19:15533775-15533776(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828
chr19:15533909-15533910(-) m6A CDS       24284625//25456834//27773535
chr19:15533947-15533948(-) m6A CDS       24284625//25456834//27773535
chr19:15533962-15533963(-) m6A CDS       24284625//25456834//27773535
chr19:15534927-15534928(-) m6A exon//intron       24284625//27773535
chr19:15535039-15535040(-) m6A CDS//exon       27371828
chr19:15535131-15535132(-) m6A CDS//exon       27371828//27773536
chr19:15535431-15535432(-) m6A CDS//exon       24209618//27371828//27773536
chr19:15535694-15535695(-) m6A CDS       24284625
chr19:15535714-15535715(-) m6A CDS       24284625
chr19:15535800-15535801(-) m6A CDS       24284625//22575960
chr19:15536063-15536064(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr19:15536078-15536079(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr19:15536097-15536098(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr19:15536102-15536103(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr19:15536114-15536115(-) m6A CDS       24284625//24981863//27773535//27371828//22575960
chr19:15536146-15536147(-) m6A CDS       24284625//24981863//22575960
chr19:15536265-15536266(-) m6A CDS       24284625//27773536//22575960
chr19:15536365-15536366(-) m6A CDS       27773536//22575960
chr19:15536518-15536519(-) m6A CDS       27371828//27773536//22575960
chr19:15537797-15537798(-) m6A CDS       24284625//25456834//27371828
chr19:15537812-15537813(-) m6A CDS       24284625//25456834//27371828
chr19:15537853-15537854(-) m6A CDS       24284625//25456834//24981863//27371828
chr19:15537907-15537908(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828
chr19:15538055-15538056(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr19:15538150-15538151(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr19:15538170-15538171(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr19:15538283-15538284(-) m6A CDS       24284625//25456834//27371828//27773536//22575960
chr19:15538319-15538320(-) m6A CDS       24284625//25456834//27773536//22575960
chr19:15539259-15539260(-) m6A CDS//intron       24284625
chr19:15539288-15539289(-) m6A CDS//intron       24284625
chr19:15540401-15540402(-) m6A CDS//intron       24284625//24981863
chr19:15540485-15540486(-) m6A CDS//intron       24284625//25456834//24981863//22575960
chr19:15540531-15540532(-) m6A CDS//intron       24284625//25456834//24981863//27371828//22575960
chr19:15547307-15547308(-) m6A exon//intron       27773535
chr19:15547313-15547314(-) m6A exon//intron       27773535
chr19:15549606-15549607(-) m6A exon//intron       25456834//27371828//27773536
chr19:15549651-15549652(-) m6A exon//intron       25456834//27371828//27773536
chr19:15550014-15550015(-) m6A intron       24284625
chr19:15550188-15550189(-) m6A intron       24981863//27371828//27773536
chr19:15550236-15550237(-) m6A intron       24981863//27371828
chr19:15550299-15550300(-) m6A intron       24981863
chr19:15550761-15550762(-) m6A intron       24981863//27371828//27773536
chr19:15550948-15550949(-) m6A intron       24284625//25456834//24981863//27371828
chr19:15550998-15550999(-) m6A intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:15551005-15551006(-) m6A intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:15551011-15551012(-) m6A intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:15551079-15551080(-) m6A intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:15551115-15551116(-) m6A intron       25456834//24981863//27371828//22608085
chr19:15551133-15551134(-) m6A intron       25456834//24981863//27371828//22608085
chr19:15551193-15551194(-) m6A intron       25456834//24981863//27371828//22608085
chr19:15551276-15551277(-) m6A intron       24284625//25456834//24981863//27773536
chr19:15551294-15551295(-) m6A intron       24284625//25456834//24981863//27773536
chr19:15551345-15551346(-) m6A intron       24284625//25456834//24981863//27371828//27773536
chr19:15551353-15551354(-) m6A intron       24284625//25456834//24981863//27371828//27773536
chr19:15551370-15551371(-) m6A intron       25456834//24981863//27371828//27773536
chr19:15558942-15558943(-) m6A CDS       24284625//25456834//27371828//27773536
chr19:15559032-15559033(-) m6A CDS       25456834//27371828//27773536
chr19:15559058-15559059(-) m6A CDS       25456834//27371828//27773536
chr19:15560339-15560340(-) m6A 5'UTR//intron       27773536
chr19:15560346-15560347(-) m6A 5'UTR//intron       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate WIZ
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART13-5p
Interactor2: WIZ

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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