Basic Information:

  VIRBase ID:  

VHID00403675

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-5p:  MIMAT0004818          TIMM13:  NM_012458     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-5p	TIMM13
miRBase Accession/Entrez ID	MIMAT0004818	26517
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ppv1//TIM13//TIM13B//TIMM13A//TIMM13B

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TIMM13	chr19:2426562(-) G-A exon 3'UTR    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TIMM13	chr19:2426556-2426557(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//27371828//22608085 chr19:2426617-2426618(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr19:2426640-2426641(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr19:2426653-2426654(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr19:2426821-2426822(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr19:2426830-2426831(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr19:2427000-2427001(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960 chr19:2427021-2427022(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960 chr19:2427266-2427267(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960 chr19:2427283-2427284(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960 chr19:2427311-2427312(-) m6A CDS       24284625//24209618//27773535//27371828//27773536//22575960 chr19:2427478-2427479(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//27773536//22575960 chr19:2427625-2427626(-) m6A 5'UTR       24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TIMM13	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-5p
Interactor2: TIMM13

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg