Detail Information

Basic Information:


  VIRBase ID:  

VHID00402791

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:           ARL16:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART10-5p ARL16
miRBase
Accession/Entrez ID		 MIMAT0004817 339231
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ARL16
chr17:79648413(-) A-I      3'UTR
chr17:79648406(-) A-I      3'UTR
chr17:79648468(-) A-I      3'UTR
chr17:79648271(-) A-I      3'UTR
chr17:79648504(-) A-I      3'UTR
chr17:79648489(-) A-I      3'UTR
chr17:79648370(-) A-I      3'UTR
chr17:79648526(-) A-I      3'UTR
chr17:79648428(-) A-I      3'UTR
chr17:79648400(-) A-I      3'UTR
chr17:79648435(-) A-I      3'UTR
chr17:79648438(-) A-I      3'UTR
chr17:79648270(-) A-I      3'UTR
chr17:79648360(-) A-I      3'UTR
chr17:79648328(-) A-I      3'UTR
chr17:79648343(-) A-I      3'UTR
chr17:79648510(-) A-I      3'UTR
chr17:79648396(-) A-I      3'UTR
chr17:79648353(-) A-I      3'UTR
chr17:79648410(-) A-I      3'UTR
chr17:79648512(-) A-I      3'UTR
chr17:79648424(-) A-I      3'UTR
chr17:79648401(-) A-I      3'UTR
chr17:79648340(-) A-I      3'UTR
chr17:79648408(-) A-I      3'UTR
chr17:79648407(-) A-I      3'UTR
chr17:79648321(-) A-I      3'UTR
chr17:79648345(-) A-I      3'UTR
chr17:79648409(-) A-I      3'UTR
chr17:79648432(-) A-I      3'UTR
chr17:79648369(-) A-I      3'UTR
chr17:79648329(-) A-I      3'UTR
chr17:79648425(-) A-I      3'UTR
chr17:79648404(-) A-I      3'UTR
chr17:79648503(-) A-I      3'UTR
chr17:79648463(-) A-I      3'UTR
chr17:79648337(-) A-I      3'UTR
chr17:79648434(-) A-I      3'UTR
chr17:79648449(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ARL16
chr17:79648270(-) A-I exon 3'UTR    15342557
chr17:79648271(-) A-I exon 3'UTR    15342557
chr17:79648321(-) A-I exon 3'UTR    15342557
chr17:79648328(-) A-I exon 3'UTR    15342557
chr17:79648329(-) A-I exon 3'UTR    15342557
chr17:79648337(-) A-I exon 3'UTR    15342557
chr17:79648343(-) A-I exon 3'UTR    15342557
chr17:79648345(-) A-I exon 3'UTR    15342557
chr17:79648353(-) A-I exon 3'UTR    15342557
chr17:79648369(-) A-I exon 3'UTR    15342557
chr17:79648396(-) A-I exon 3'UTR    15342557
chr17:79648400(-) A-I exon 3'UTR    15342557
chr17:79648401(-) A-I exon 3'UTR    15342557
chr17:79648404(-) A-I exon 3'UTR    15342557
chr17:79648410(-) A-I exon 3'UTR    15342557
chr17:79648424(-) A-I exon 3'UTR    15342557
chr17:79648425(-) A-I exon 3'UTR    15342557
chr17:79648428(-) A-I exon 3'UTR    15342557
chr17:79648432(-) A-I exon 3'UTR    15342557
chr17:79648434(-) A-I exon 3'UTR    15342557
chr17:79648435(-) A-I exon 3'UTR    15342557
chr17:79648449(-) A-I exon 3'UTR    15342557
chr17:79648463(-) A-I exon 3'UTR    15342557
chr17:79648489(-) A-I exon 3'UTR    15342557
chr17:79648503(-) A-I exon 3'UTR    15342557
chr17:79648504(-) A-I exon 3'UTR    15342557
chr17:79648512(-) A-I exon 3'UTR    15342557
chr17:79649309(-) A-I intron -    15342557
chr17:79649401(-) A-I intron -    15342557
chr17:79649405(-) A-I intron -    15342557
chr17:79649411(-) A-I intron -    15342557
chr17:79649437(-) A-I intron -    15342557
chr17:79649440(-) A-I intron -    15342557
chr17:79649444(-) A-I intron -    15342557
chr17:79649445(-) A-I intron -    15342557
chr17:79649451(-) A-I intron -    15342557
chr17:79649452(-) A-I intron -    15342557
chr17:79649501(-) A-I intron -    15342557
chr17:79649506(-) A-I intron -    15342557
chr17:79649509(-) A-I intron -    15342557
chr17:79649522(-) A-I intron -    15342557
chr17:79649539(-) A-I intron -    15342557
chr17:79649544(-) A-I intron -    15342557
chr17:79649545(-) A-I intron -    15342557
chr17:79649553(-) A-I intron -    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ARL16
chr17:79648208-79648209(-) m6A 3'UTR       24981863//27773535
chr17:79648220-79648221(-) m6A 3'UTR//exon       24981863//27773535
chr17:79648258-79648259(-) m6A 3'UTR//exon       24981863//27773535
chr17:79648327-79648328(-) m6A 3'UTR//exon       24981863//27773535
chr17:79648344-79648345(-) m6A 3'UTR//exon       24981863//27773535
chr17:79648446-79648447(-) m6A 3'UTR//exon       24209618
chr17:79648586-79648587(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr17:79648828-79648829(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr17:79648852-79648853(-) m6A 3'UTR//CDS//exon       24981863//27773535//27773536
chr17:79649104-79649105(-) m6A 3'UTR//CDS//exon       27773535
chr17:79649361-79649362(-) m6A exon//intron       24981863
chr17:79649368-79649369(-) m6A exon//intron       24981863
chr17:79650663-79650664(-) m6A 5'UTR//exon//intron       24284625//24981863
chr17:79650698-79650699(-) m6A exon//intron       24284625//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ARL16
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART10-5p
Interactor2: ARL16

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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