Basic Information:

  VIRBase ID:  

VHID00402592

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          ZNF48:  NM_001214907     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	ZNF48
miRBase Accession/Entrez ID	MIMAT0004817	197407
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZNF553

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF48	chr16:30391180(+) A-I      intronic chr16:30391722(+) A-I      intronic chr16:30391740(+) A-I      intronic chr16:30391764(+) A-I      intronic chr16:30397471(+) A-I      intronic chr16:30397485(+) A-I      intronic chr16:30391753(+) A-I      intronic chr16:30394627(+) A-I      intronic chr16:30395336(+) A-I      intronic chr16:30395443(+) A-I      intronic chr16:30395794(+) A-I      intronic chr16:30395795(+) A-I      intronic chr16:30396011(+) A-I      intronic chr16:30396020(+) A-I      intronic chr16:30396037(+) A-I      intronic chr16:30397265(+) A-I      intronic chr16:30397489(+) A-I      intronic chr16:30397515(+) A-I      intronic chr16:30397778(+) A-I      intronic chr16:30397788(+) A-I      intronic chr16:30399019(+) A-I      intronic chr16:30399069(+) A-I      intronic chr16:30400000(+) A-I      intronic chr16:30400009(+) A-I      intronic chr16:30400024(+) A-I      intronic chr16:30403443(+) A-I      intronic chr16:30394584(+) A-I      intronic chr16:30391188(+) A-I      intronic chr16:30391189(+) A-I      intronic chr16:30391190(+) A-I      intronic chr16:30391202(+) A-I      intronic chr16:30394248(+) A-I      intronic chr16:30394348(+) A-I      intronic chr16:30399730(+) A-I      intronic chr16:30394784(+) A-I      intronic chr16:30396088(+) A-I      intronic chr16:30397867(+) A-I      intronic chr16:30395383(+) A-I      intronic chr16:30396399(+) A-I      intronic chr16:30394240(+) A-I      intronic chr16:30396417(+) A-I      intronic chr16:30397453(+) A-I      intronic chr16:30399954(+) A-I      intronic chr16:30399060(+) A-I      intronic chr16:30394405(+) A-I      intronic chr16:30401284(+) A-I      intronic chr16:30401271(+) A-I      intronic chr16:30394285(+) A-I      intronic chr16:30395477(+) A-I      intronic chr16:30399037(+) A-I      intronic chr16:30394341(+) A-I      intronic chr16:30399955(+) A-I      intronic chr16:30405405(+) A-I      intronic chr16:30395413(+) A-I      intronic chr16:30396117(+) A-I      intronic chr16:30394460(+) A-I      intronic chr16:30403694(+) A-I      intronic chr16:30399336(+) A-I      intronic chr16:30394428(+) A-I      intronic chr16:30394222(+) A-I      intronic chr16:30394717(+) A-I      intronic chr16:30401410(+) A-I      intronic chr16:30402207(+) A-I      intronic chr16:30395337(+) A-I      intronic chr16:30398621(+) A-I      intronic chr16:30402267(+) A-I      intronic chr16:30396376(+) A-I      intronic chr16:30395425(+) A-I      intronic chr16:30395997(+) A-I      intronic chr16:30399382(+) A-I      intronic chr16:30403228(+) A-I      intronic chr16:30395518(+) A-I      intronic chr16:30396034(+) A-I      intronic chr16:30400601(+) A-I      intronic chr16:30395588(+) A-I      intronic chr16:30398711(+) A-I      intronic chr16:30397246(+) A-I      intronic chr16:30395586(+) A-I      intronic chr16:30394695(+) A-I      intronic chr16:30396052(+) A-I      intronic chr16:30397525(+) A-I      intronic chr16:30403744(+) A-I      intronic chr16:30400579(+) A-I      intronic chr16:30395831(+) A-I      intronic chr16:30397887(+) A-I      intronic chr16:30398620(+) A-I      intronic chr16:30395531(+) A-I      intronic chr16:30399563(+) A-I      intronic chr16:30398223(+) A-I      intronic chr16:30401216(+) A-I      intronic chr16:30400774(+) A-I      intronic chr16:30396386(+) A-I      intronic chr16:30394239(+) A-I      intronic chr16:30396339(+) A-I      intronic chr16:30397447(+) A-I      intronic chr16:30398042(+) A-I      intronic chr16:30394466(+) A-I      intronic chr16:30394420(+) A-I      intronic chr16:30394382(+) A-I      intronic chr16:30396692(+) A-I      intronic chr16:30394338(+) A-I      intronic chr16:30397411(+) A-I      intronic chr16:30402650(+) A-I      intronic chr16:30399729(+) A-I      intronic chr16:30398933(+) A-I      intronic chr16:30398980(+) A-I      intronic chr16:30396411(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF48	chr16:30389485-30389486(+) m6A 5'UTR       27371828 chr16:30389502-30389503(+) m1A 5'UTR       26863196 chr16:30389509-30389510(+) m6A 5'UTR       27371828 chr16:30389519-30389520(+) m6A 5'UTR       24284625//27371828 chr16:30389702-30389703(+) m6A 5'UTR//intron       24284625//27371828 chr16:30406505-30406506(+) m6A 5'UTR//CDS//intron       27371828 chr16:30408693-30408694(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr16:30408731-30408732(+) m1A 5'UTR//CDS       26863196 chr16:30408774-30408775(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30408791-30408792(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30408845-30408846(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30408870-30408871(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30408957-30408958(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30408967-30408968(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30408984-30408985(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30409041-30409042(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30409051-30409052(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30409197-30409198(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30409207-30409208(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30409291-30409292(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:30409371-30409372(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30409385-30409386(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30409595-30409596(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30409614-30409615(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30409727-30409728(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:30409974-30409975(+) m6A CDS       24284625//24981863 chr16:30410001-30410002(+) m6A CDS       24284625//24981863 chr16:30410184-30410185(+) m6A CDS       24284625//25456834 chr16:30410250-30410251(+) m6A CDS       24284625//25456834//24981863//22608085 chr16:30410418-30410419(+) m6A CDS       24284625//25456834//24981863//22608085 chr16:30410458-30410459(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr16:30410570-30410571(+) m6A 3'UTR       24209618//25456834//24981863//27773535//22608085 chr16:30410593-30410594(+) m6A 3'UTR       24209618//24981863//27773535//22608085 chr16:30410618-30410619(+) m6A 3'UTR       24209618//24981863//27773535//22608085 chr16:30410656-30410657(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr16:30410701-30410702(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr16:30410719-30410720(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr16:30410756-30410757(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr16:30411066-30411067(+) m6A 3'UTR       24284625//25456834//22608085 chr16:30411077-30411078(+) m6A 3'UTR       24284625//25456834//22608085 chr16:30411119-30411120(+) m6A 3'UTR       24284625//25456834//22608085 chr16:30411134-30411135(+) m6A 3'UTR       24284625//25456834//22608085 chr16:30411141-30411142(+) m6A 3'UTR       24284625//25456834//22608085 chr16:30411301-30411302(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr16:30411358-30411359(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr16:30411364-30411365(+) m6A 3'UTR       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF48	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: ZNF48

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg