Basic Information:

  VIRBase ID:  

VHID00402315

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          NDUFA11:  NR_034166     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	NDUFA11
miRBase Accession/Entrez ID	MIMAT0004817	126328
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	B14.7//CI-B14.7//MC1DN14

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NDUFA11	chr19:5898674(-) A-I      intronic chr19:5898823(-) A-I      intronic chr19:5898705(-) A-I      intronic chr19:5902863(-) A-I      intronic chr19:5902914(-) A-I      intronic chr19:5902526(-) A-I      intronic chr19:5893297(-) A-I      Syn:Thr->Thr chr19:5893234(-) A-I      Syn:Ser->Ser chr19:5891409(-) A-I      3'UTR chr19:5891408(-) A-I      3'UTR chr19:5893468(-) A-I      intronic chr19:5893303(-) A-I      intronic chr19:5902873(-) A-I      intronic chr19:5902874(-) A-I      intronic chr19:5891539(-) A-I      3'UTR chr19:5902922(-) A-I      intronic chr19:5902870(-) A-I      intronic chr19:5899538(-) A-I      intronic chr19:5899600(-) A-I      intronic chr19:5902936(-) A-I      intronic chr19:5898628(-) A-I      intronic chr19:5891376(-) A-I      3'UTR chr19:5902536(-) A-I      intronic chr19:5898763(-) A-I      intronic chr19:5891431(-) A-I      3'UTR chr19:5902453(-) A-I      intronic chr19:5902570(-) A-I      intronic chr19:5898785(-) A-I      intronic chr19:5893584(-) A-I      intronic chr19:5893472(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NDUFA11	chr19:5899599(-) A-G intron -    22484847 chr19:5899600(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NDUFA11	chr19:5893263-5893264(-) m6A CDS       - chr19:5893298-5893299(-) m6A CDS       27773535 chr19:5894734-5894735(-) m6A 3'UTR//exon//intron       27773535//22575960 chr19:5894764-5894765(-) m6A 3'UTR//CDS//exon//intron       27773535//22575960 chr19:5895060-5895061(-) m6A 3'UTR//intron       25456834//27371828 chr19:5895096-5895097(-) m6A 3'UTR//intron       24284625//25456834//27371828 chr19:5895201-5895202(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22608085 chr19:5895207-5895208(-) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr19:5895250-5895251(-) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr19:5895258-5895259(-) m6A 3'UTR//intron       24284625//25456834//24981863//22608085 chr19:5895346-5895347(-) m6A 3'UTR//intron       25456834 chr19:5896343-5896344(-) m6A 3'UTR//intron       27773535 chr19:5896368-5896369(-) m6A 3'UTR//intron       27773535 chr19:5896510-5896511(-) m6A 3'UTR//CDS//exon       27773535 chr19:5896660-5896661(-) m6A exon//intron       27773535//22575960 chr19:5896934-5896935(-) m6A 3'UTR//CDS       27773535//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NDUFA11	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: NDUFA11

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg