Basic Information:

  VIRBase ID:  

VHID00402180

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          DMKN:  NM_001190347     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	DMKN
miRBase Accession/Entrez ID	MIMAT0004817	93099
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	UNQ729//ZD52F10

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DMKN	chr19:35999927(-) A-I      intronic chr19:35989218(-) A-I      intronic chr19:35995362(-) A-I      intronic chr19:35989140(-) A-I      intronic chr19:35995428(-) A-I      intronic chr19:35995339(-) A-I      intronic chr19:35995330(-) A-I      intronic chr19:35995311(-) A-I      intronic chr19:35994516(-) A-I      intronic chr19:35995367(-) A-I      intronic chr19:35994548(-) A-I      intronic chr19:35995299(-) A-I      intronic chr19:35994551(-) A-I      intronic chr19:35989198(-) A-I      intronic chr19:35989212(-) A-I      intronic chr19:35989170(-) A-I      intronic chr19:35997937(-) A-I      intronic chr19:35997917(-) A-I      intronic chr19:35997724(-) A-I      intronic chr19:35995422(-) A-I      intronic chr19:35995233(-) A-I      intronic chr19:35989215(-) A-I      intronic chr19:35989216(-) A-I      intronic chr19:35997806(-) A-I      intronic chr19:35994605(-) A-I      intronic chr19:35989202(-) A-I      intronic chr19:35989384(-) A-I      intronic chr19:35988869(-) A-I      intronic chr19:35995458(-) A-I      intronic chr19:35997699(-) A-I      intronic chr19:35988980(-) A-I      intronic chr19:35989217(-) A-I      intronic chr19:35989175(-) A-I      intronic chr19:35989181(-) A-I      intronic chr19:36000040(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DMKN	chr19:35997724(-) A-G intron -    22484847 chr19:35997792(-) C-T intron -    22484847 chr19:35997806(-) A-G intron -    22484847 chr19:35997988(-) A-G intron -    22484847 chr19:35997989(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DMKN	chr19:35988551-35988552(-) m6A 3'UTR//exon//intron       - chr19:35988594-35988595(-) m6A exon//intron       - chr19:35988601-35988602(-) m6A exon//intron       - chr19:35988692-35988693(-) m6A exon//intron       - chr19:35988793-35988794(-) m6A exon//intron       25456834 chr19:35989229-35989230(-) m6A exon//intron       25456834 chr19:35989239-35989240(-) m6A exon//intron       25456834 chr19:35989257-35989258(-) m6A exon//intron       25456834 chr19:35990167-35990168(-) m6A exon//intron       25456834 chr19:35990929-35990930(-) m6A 3'UTR//CDS//exon       - chr19:35991064-35991065(-) m6A 3'UTR//exon//intron       - chr19:35991124-35991125(-) m6A 3'UTR//exon//intron       - chr19:35993071-35993072(-) m6A 3'UTR//CDS//exon//intron       27773535 chr19:35993076-35993077(-) m6A 3'UTR//CDS//exon//intron       27773535 chr19:35994221-35994222(-) m6A 3'UTR//exon//intron       24981863//27773535 chr19:35994266-35994267(-) m6A 3'UTR//exon//intron       24981863//27773535 chr19:35994314-35994315(-) m6A 3'UTR//exon//intron       27773535 chr19:35996623-35996624(-) m6A 3'UTR//CDS//exon       27773535 chr19:35996886-35996887(-) m6A 3'UTR//5'UTR//CDS//exon//intron       27773535 chr19:35997113-35997114(-) m6A exon//intron       - chr19:35997184-35997185(-) m6A exon//intron       - chr19:35997197-35997198(-) m6A exon//intron       - chr19:35997246-35997247(-) m6A exon//intron       - chr19:35997299-35997300(-) m6A exon//intron       - chr19:35998369-35998370(-) m6A 3'UTR//CDS//exon//intron       - chr19:35998565-35998566(-) m6A exon//intron       - chr19:35998582-35998583(-) m6A exon//intron       - chr19:36000897-36000898(-) m6A exon//intron       27773536 chr19:36000913-36000914(-) m6A exon//intron       27773536 chr19:36001091-36001092(-) m6A 3'UTR//5'UTR//CDS//exon       24981863 chr19:36001097-36001098(-) m6A 5'UTR//CDS//exon       24981863 chr19:36001184-36001185(-) m6A 5'UTR//exon//intron       25456834//24981863 chr19:36001259-36001260(-) m6A 5'UTR//exon//intron       25456834//24981863//22608085 chr19:36004407-36004408(-) m6A 5'UTR       25456834 chr19:36004424-36004425(-) m6A 5'UTR       25456834 chr19:36004469-36004470(-) m6A 5'UTR       25456834 chr19:36004491-36004492(-) m6A 5'UTR       25456834 chr19:36004508-36004509(-) m6A 5'UTR       25456834 chr19:36004529-36004530(-) m6A 5'UTR       25456834 chr19:36004555-36004556(-) m6A 5'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DMKN	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: DMKN

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg