Basic Information:

  VIRBase ID:  

VHID00402016

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          DGAT2:  NM_032564     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	DGAT2
miRBase Accession/Entrez ID	MIMAT0004817	84649
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARAT//GS1999FULL//HMFN1045

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DGAT2	chr11:75492651(+) A-I      intronic chr11:75483914(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DGAT2	chr11:75480122-75480123(+) m6A CDS//exon//intron       - chr11:75507135-75507136(+) m6A exon//intron       - chr11:75507145-75507146(+) m6A exon//intron       - chr11:75507168-75507169(+) m6A exon//intron       - chr11:75512126-75512127(+) m6A 3'UTR//exon       - chr11:75512179-75512180(+) m6A 3'UTR//exon       24284625 chr11:75512278-75512279(+) m6A 3'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DGAT2	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: DGAT2

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg