Basic Information:

  VIRBase ID:  

VHID00401868

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          KCNH6:  NM_173092     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	KCNH6
miRBase Accession/Entrez ID	MIMAT0004817	81033
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ERG-2//ERG2//hERG-2//HERG2//Kv11.2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KCNH6	chr17:61613795(+) A-I      intronic chr17:61614279(+) A-I      intronic chr17:61623374(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KCNH6	chr17:61613220-61613221(+) m6A 3'UTR//CDS//intron       25456834 chr17:61613240-61613241(+) m6A 3'UTR//CDS//intron       25456834 chr17:61613309-61613310(+) m6A 3'UTR//CDS//intron       25456834 chr17:61623015-61623016(+) m6A 3'UTR//CDS       25456834 chr17:61623054-61623055(+) m6A 3'UTR//CDS       25456834 chr17:61623059-61623060(+) m6A 3'UTR//CDS       25456834 chr17:61623079-61623080(+) m6A 3'UTR//CDS       25456834 chr17:61623085-61623086(+) m6A 3'UTR//CDS       25456834 chr17:61623145-61623146(+) m6A 3'UTR//CDS       25456834 chr17:61623181-61623182(+) m6A 3'UTR//CDS       25456834//24981863 chr17:61623210-61623211(+) m6A 3'UTR//CDS       25456834//24981863 chr17:61623220-61623221(+) m6A 3'UTR//CDS       25456834//24981863 chr17:61623263-61623264(+) m6A 3'UTR       25456834//24981863 chr17:61623277-61623278(+) m6A 3'UTR       25456834//24981863 chr17:61623290-61623291(+) m6A 3'UTR       25456834//24981863 chr17:61623394-61623395(+) m6A 3'UTR//intron       25456834

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: KCNH6

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg