Basic Information:

  VIRBase ID:  

VHID00401621

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          CDH22:  NM_021248     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	CDH22
miRBase Accession/Entrez ID	MIMAT0004817	64405
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf25//dJ998H6.1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CDH22	chr20:44812298(-) A-I      intronic chr20:44812317(-) A-I      intronic chr20:44809517(-) A-I      intronic chr20:44812272(-) A-I      intronic chr20:44812270(-) A-I      intronic chr20:44809511(-) A-I      intronic chr20:44809519(-) A-I      intronic chr20:44809489(-) A-I      intronic chr20:44812286(-) A-I      intronic chr20:44809497(-) A-I      intronic chr20:44814836(-) A-I      intronic chr20:44812173(-) A-I      intronic chr20:44855117(-) A-I      intronic chr20:44813618(-) A-I      intronic chr20:44813613(-) A-I      intronic chr20:44809630(-) A-I      intronic chr20:44813642(-) A-I      intronic chr20:44846567(-) A-I      intronic chr20:44814277(-) A-I      intronic chr20:44833014(-) A-I      intronic chr20:44812861(-) A-I      intronic chr20:44822628(-) A-I      intronic chr20:44810593(-) A-I      intronic chr20:44812962(-) A-I      intronic chr20:44814607(-) A-I      intronic chr20:44814385(-) A-I      intronic chr20:44822536(-) A-I      intronic chr20:44814667(-) A-I      intronic chr20:44814744(-) A-I      intronic chr20:44822588(-) A-I      intronic chr20:44812931(-) A-I      intronic chr20:44810532(-) A-I      intronic chr20:44837371(-) A-I      intronic chr20:44814784(-) A-I      intronic chr20:44814452(-) A-I      intronic chr20:44814809(-) A-I      intronic chr20:44812951(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CDH22	chr20:44838731-44838732(-) m6A exon//intron       25456834 chr20:44838743-44838744(-) m6A exon//intron       25456834 chr20:44838783-44838784(-) m6A exon//intron       25456834 chr20:44838885-44838886(-) m6A exon//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CDH22	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: CDH22

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg