Basic Information:

  VIRBase ID:  

VHID00400998

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          MRPS2:  NR_051969     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	MRPS2
miRBase Accession/Entrez ID	MIMAT0004817	51116
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CGI-91//COXPD36//MRP-S2//S2mt

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MRPS2	chr9:138392530-138392531(+) m6A 5'UTR       24284625//24981863 chr9:138392808-138392809(+) m6A CDS//intron       24981863 chr9:138392821-138392822(+) m6A CDS//intron       24981863 chr9:138392960-138392961(+) m6A CDS//exon       - chr9:138393035-138393036(+) m6A exon//intron       - chr9:138394103-138394104(+) m6A exon//intron       24284625 chr9:138394439-138394440(+) m6A exon//intron       24284625 chr9:138394449-138394450(+) m6A exon//intron       24284625 chr9:138394458-138394459(+) m6A exon//intron       24284625 chr9:138395422-138395423(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085 chr9:138395444-138395445(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085 chr9:138395476-138395477(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085 chr9:138395557-138395558(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085 chr9:138395659-138395660(+) m6A CDS//exon       24284625//24209618//24981863//26404942//22575960//22608085 chr9:138395734-138395735(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138395758-138395759(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138395929-138395930(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138396002-138396003(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138396102-138396103(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138396124-138396125(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138396140-138396141(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138396174-138396175(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138396229-138396230(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:138396458-138396459(+) m6A 3'UTR       24284625//24981863//27773535 chr9:138396496-138396497(+) m6A 3'UTR       24284625//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MRPS2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: MRPS2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg