Basic Information:

  VIRBase ID:  

VHID00400390

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          ZNF263:  NM_005741     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	ZNF263
miRBase Accession/Entrez ID	MIMAT0004817	10127
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FPM315//ZKSCAN12//ZSCAN44

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF263	chr16:3338876(+) A-I      intronic chr16:3338745(+) A-I      intronic chr16:3337247(+) A-I      intronic chr16:3337191(+) A-I      intronic chr16:3338141(+) A-I      intronic chr16:3338056(+) A-I      intronic chr16:3338177(+) A-I      intronic chr16:3338670(+) A-I      intronic chr16:3338042(+) A-I      intronic chr16:3338038(+) A-I      intronic chr16:3338013(+) A-I      intronic chr16:3338702(+) A-I      intronic chr16:3337988(+) A-I      intronic chr16:3338704(+) A-I      intronic chr16:3337368(+) A-I      intronic chr16:3336975(+) A-I      intronic chr16:3337295(+) A-I      intronic chr16:3337250(+) A-I      intronic chr16:3338849(+) A-I      intronic chr16:3337211(+) A-I      intronic chr16:3337321(+) A-I      intronic chr16:3337256(+) A-I      intronic chr16:3337990(+) A-I      intronic chr16:3338105(+) A-I      intronic chr16:3337316(+) A-I      intronic chr16:3338131(+) A-I      intronic chr16:3337327(+) A-I      intronic chr16:3338746(+) A-I      intronic chr16:3338739(+) A-I      intronic chr16:3337228(+) A-I      intronic chr16:3338903(+) A-I      intronic chr16:3338830(+) A-I      intronic chr16:3337005(+) A-I      intronic chr16:3337240(+) A-I      intronic chr16:3337432(+) A-I      intronic chr16:3338132(+) A-I      intronic chr16:3337292(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF263	chr16:3338739(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF263	chr16:3314141-3314142(+) m6A intron       - chr16:3314278-3314279(+) m6A intron       - chr16:3314326-3314327(+) m6A intron       - chr16:3314382-3314383(+) m6A intron       24284625 chr16:3314462-3314463(+) m6A intron       24284625 chr16:3314513-3314514(+) m6A intron       24284625 chr16:3314525-3314526(+) m6A intron       24284625 chr16:3314691-3314692(+) m6A intron       - chr16:3317164-3317165(+) m6A intron       - chr16:3317174-3317175(+) m6A intron       24284625 chr16:3317192-3317193(+) m6A intron       24284625 chr16:3317208-3317209(+) m6A intron       24284625 chr16:3317222-3317223(+) m6A intron       24284625 chr16:3317282-3317283(+) m6A intron       24284625 chr16:3317296-3317297(+) m6A intron       24284625 chr16:3333037-3333038(+) m6A 5'UTR//intron       25456834 chr16:3333408-3333409(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr16:3333638-3333639(+) m6A 5'UTR//intron       24209618//24981863//22608085 chr16:3333702-3333703(+) m6A 5'UTR//intron       24209618//25456834//24981863//22575960//22608085 chr16:3333810-3333811(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3333879-3333880(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3333919-3333920(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3334192-3334193(+) m6A CDS//intron       24284625 chr16:3334198-3334199(+) m6A CDS//intron       24284625 chr16:3335065-3335066(+) m6A CDS//intron       24284625 chr16:3335079-3335080(+) m6A CDS//intron       24284625 chr16:3335115-3335116(+) m6A CDS//intron       24284625 chr16:3335157-3335158(+) m6A CDS//intron       24284625 chr16:3335722-3335723(+) m6A CDS//intron       24284625//24209618 chr16:3335731-3335732(+) m6A CDS//intron       24284625//24209618 chr16:3336110-3336111(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863 chr16:3336140-3336141(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863 chr16:3336155-3336156(+) m6A 3'UTR//intron       24209618//24981863 chr16:3336226-3336227(+) m6A 3'UTR//intron       24981863 chr16:3336232-3336233(+) m6A 3'UTR//intron       24981863 chr16:3339410-3339411(+) m6A 3'UTR//5'UTR//CDS       24284625//24209618//24981863//22608085 chr16:3339443-3339444(+) m6A 3'UTR//5'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr16:3339513-3339514(+) m6A 3'UTR//5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3339600-3339601(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:3339618-3339619(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:3339633-3339634(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:3339680-3339681(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:3339717-3339718(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:3339734-3339735(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:3339758-3339759(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:3339842-3339843(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3340120-3340121(+) m6A CDS       24284625//24981863//27773535//22608085 chr16:3340137-3340138(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:3340196-3340197(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:3340281-3340282(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:3340291-3340292(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr16:3340308-3340309(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr16:3340337-3340338(+) m6A CDS       24284625//24209618//24981863//26404942//22608085 chr16:3340392-3340393(+) m6A CDS       24284625//24209618//24981863//26404942//22608085 chr16:3340418-3340419(+) m6A CDS       24284625//24209618//24981863//26404942//22608085 chr16:3340476-3340477(+) m6A CDS       24284625//24209618//24981863//26404942//22608085 chr16:3340543-3340544(+) m6A CDS       24284625//24209618//24981863//22608085 chr16:3340722-3340723(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr16:3340935-3340936(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3340974-3340975(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3341027-3341028(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3341162-3341163(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr16:3341172-3341173(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr16:3341297-3341298(+) m6A 3'UTR//intron       24284625//24981863//27773535 chr16:3341453-3341454(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr16:3349125-3349126(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr16:3349165-3349166(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3349229-3349230(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3349267-3349268(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3349511-3349512(+) m6A 3'UTR//intron       27773535 chr16:3349564-3349565(+) m6A 3'UTR//intron       24981863//27773535 chr16:3349793-3349794(+) m6A 3'UTR//intron       27773535 chr16:3349802-3349803(+) m6A 3'UTR//intron       27773535 chr16:3349818-3349819(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr16:3349830-3349831(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr16:3349845-3349846(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr16:3349850-3349851(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr16:3349983-3349984(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3350104-3350105(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr16:3350133-3350134(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr16:3350168-3350169(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr16:3350173-3350174(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3350180-3350181(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3350275-3350276(+) m6A 3'UTR//intron       27773535//22608085 chr16:3350327-3350328(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3350363-3350364(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:3350561-3350562(+) m6A 3'UTR//intron       27773535//22608085 chr16:3350631-3350632(+) m6A 3'UTR//intron       27773535 chr16:3350648-3350649(+) m6A 3'UTR//intron       27773535 chr16:3350685-3350686(+) m6A 3'UTR//intron       27773535 chr16:3350700-3350701(+) m6A 3'UTR//intron       27773535 chr16:3350705-3350706(+) m6A 3'UTR//intron       27773535 chr16:3350755-3350756(+) m6A 3'UTR//intron       24284625//27773535 chr16:3350981-3350982(+) m6A 3'UTR       22608085 chr16:3351024-3351025(+) m6A 3'UTR       24981863//22608085 chr16:3351049-3351050(+) m6A 3'UTR       24981863//22608085 chr16:3351080-3351081(+) m6A 3'UTR       24981863//22608085 chr16:3351150-3351151(+) m6A 3'UTR       24981863//22608085 chr16:3351260-3351261(+) m6A 3'UTR       24284625//24981863//22608085 chr16:3351299-3351300(+) m6A 3'UTR       24284625//24209618//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF263	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: ZNF263

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg