Basic Information:

  VIRBase ID:  

VHID00399887

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:  MIMAT0004817          SUV39H1:  NM_003173     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-5p	SUV39H1
miRBase Accession/Entrez ID	MIMAT0004817	6839
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	H3-K9-HMTase 1//KMT1A//MG44//SUV39H

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SUV39H1	chrX:48557334-48557335(+) m6A CDS       24284625//22575960 chrX:48557388-48557389(+) m6A CDS       24284625//24981863//22575960 chrX:48558483-48558484(+) m6A CDS       24284625//24209618//24981863//22575960 chrX:48558521-48558522(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chrX:48558590-48558591(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chrX:48558631-48558632(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chrX:48558647-48558648(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chrX:48558770-48558771(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chrX:48558869-48558870(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chrX:48559115-48559116(+) m6A CDS       24284625//24981863//22575960//22608085 chrX:48563659-48563660(+) m6A exon//intron       24284625//22575960 chrX:48563694-48563695(+) m6A exon//intron       24284625 chrX:48564925-48564926(+) m6A CDS//exon       24284625 chrX:48564972-48564973(+) m6A CDS//exon       24284625 chrX:48565830-48565831(+) m6A CDS//exon       24284625 chrX:48565839-48565840(+) m6A CDS//exon       24284625 chrX:48565860-48565861(+) m6A CDS//exon       24284625//24981863//22575960 chrX:48565931-48565932(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960 chrX:48565982-48565983(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960 chrX:48566124-48566125(+) m6A 3'UTR//exon       24209618//24981863 chrX:48566182-48566183(+) m6A 3'UTR//exon       24981863 chrX:48566221-48566222(+) m6A 3'UTR//exon       24981863 chrX:48567060-48567061(+) m6A 3'UTR       - chrX:48567180-48567181(+) m6A 3'UTR       24284625//24981863 chrX:48567234-48567235(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chrX:48567303-48567304(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chrX:48567321-48567322(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chrX:48567390-48567391(+) m6A 3'UTR       24284625//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SUV39H1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-5p
Interactor2: SUV39H1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg