Detail Information

Basic Information:


  VIRBase ID:  

VHID00398887

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-5p:           ADAM10:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART10-5p ADAM10
miRBase
Accession/Entrez ID		 MIMAT0004817 102
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - AD10//AD18//CD156c//CDw156//HsT18717//kuz//MADM//RAK

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADAM10
chr15:59019281(-) A-I      intronic
chr15:59019268(-) A-I      intronic
chr15:59019260(-) A-I      intronic
chr15:59019258(-) A-I      intronic
chr15:58952161(-) A-I      intronic
chr15:58952108(-) A-I      intronic
chr15:58916428(-) A-I      intronic
chr15:58952507(-) A-I      intronic
chr15:58988761(-) A-I      intronic
chr15:58896448(-) A-I      intronic
chr15:58988931(-) A-I      intronic
chr15:58971912(-) A-I      intronic
chr15:58971983(-) A-I      intronic
chr15:59032859(-) A-I      intronic
chr15:58897072(-) A-I      intronic
chr15:58972521(-) A-I      intronic
chr15:58972530(-) A-I      intronic
chr15:58972594(-) A-I      intronic
chr15:58952137(-) A-I      intronic
chr15:58972025(-) A-I      intronic
chr15:58917005(-) A-I      intronic
chr15:58973096(-) A-I      intronic
chr15:58972498(-) A-I      intronic
chr15:59007509(-) A-I      intronic
chr15:59037197(-) A-I      intronic
chr15:58988789(-) A-I      intronic
chr15:59035924(-) A-I      intronic
chr15:58967359(-) A-I      intronic
chr15:59035928(-) A-I      intronic
chr15:59037177(-) A-I      intronic
chr15:58952132(-) A-I      intronic
chr15:58973155(-) A-I      intronic
chr15:58912518(-) A-I      intronic
chr15:58973289(-) A-I      intronic
chr15:59019730(-) A-I      intronic
chr15:59018601(-) A-I      intronic
chr15:59014356(-) A-I      intronic
chr15:58951255(-) A-I      intronic
chr15:59018681(-) A-I      intronic
chr15:59015033(-) A-I      intronic
chr15:59015130(-) A-I      intronic
chr15:59019010(-) A-I      intronic
chr15:59037202(-) A-I      intronic
chr15:59037338(-) A-I      intronic
chr15:59038867(-) A-I      intronic
chr15:58952020(-) A-I      intronic
chr15:59015095(-) A-I      intronic
chr15:58951468(-) A-I      intronic
chr15:58948048(-) A-I      intronic
chr15:58916240(-) A-I      intronic
chr15:59019586(-) A-I      intronic
chr15:58954542(-) A-I      intronic
chr15:58987962(-) A-I      intronic
chr15:59015100(-) A-I      intronic
chr15:59015104(-) A-I      intronic
chr15:59014030(-) A-I      intronic
chr15:58948038(-) A-I      intronic
chr15:59007499(-) A-I      intronic
chr15:59015028(-) A-I      intronic
chr15:59015158(-) A-I      intronic
chr15:59004687(-) A-I      intronic
chr15:58972518(-) A-I      intronic
chr15:58912614(-) A-I      intronic
chr15:58988829(-) A-I      intronic
chr15:58917004(-) A-I      intronic
chr15:58952028(-) A-I      intronic
chr15:59004661(-) A-I      intronic
chr15:58988802(-) A-I      intronic
chr15:58916320(-) A-I      intronic
chr15:59005003(-) A-I      intronic
chr15:58991806(-) A-I      intronic
chr15:58939668(-) A-I      intronic
chr15:58999420(-) A-I      intronic
chr15:58907694(-) A-I      intronic
chr15:59019284(-) A-I      intronic
chr15:59019492(-) A-I      intronic
chr15:58951360(-) A-I      intronic
chr15:58971941(-) A-I      intronic
chr15:58988767(-) A-I      intronic
chr15:58952200(-) A-I      intronic
chr15:58972527(-) A-I      intronic
chr15:59032800(-) A-I      intronic
chr15:58952136(-) A-I      intronic
chr15:59035250(-) A-I      intronic
chr15:59004553(-) A-I      intronic
chr15:59018584(-) A-I      intronic
chr15:58896393(-) A-I      intronic
chr15:58951943(-) A-I      intronic
chr15:59004999(-) A-I      intronic
chr15:59014994(-) A-I      intronic
chr15:59032803(-) A-I      intronic
chr15:59038880(-) A-I      intronic
chr15:59004507(-) A-I      intronic
chr15:59011266(-) A-I      intronic
chr15:59019419(-) A-I      intronic
chr15:58994156(-) A-I      intronic
chr15:59004628(-) A-I      intronic
chr15:58971921(-) A-I      intronic
chr15:59019475(-) A-I      intronic
chr15:59019322(-) A-I      intronic
chr15:59019211(-) A-I      intronic
chr15:58973298(-) A-I      intronic
chr15:59019330(-) A-I      intronic
chr15:59035998(-) A-I      intronic
chr15:59035941(-) A-I      intronic
chr15:58951230(-) A-I      intronic
chr15:59019764(-) A-I      intronic
chr15:59004611(-) A-I      intronic
chr15:58951229(-) A-I      intronic
chr15:58963822(-) A-I      intronic
chr15:59019739(-) A-I      intronic
chr15:59015743(-) A-I      intronic
chr15:59004550(-) A-I      intronic
chr15:58972460(-) A-I      intronic
chr15:58912544(-) A-I      intronic
chr15:59014377(-) A-I      intronic
chr15:59005460(-) A-I      intronic
chr15:58897212(-) A-I      intronic
chr15:58972419(-) A-I      intronic
chr15:58988193(-) A-I      intronic
chr15:59014683(-) A-I      intronic
chr15:59012739(-) A-I      intronic
chr15:59015181(-) A-I      intronic
chr15:58936531(-) A-I      intronic
chr15:59015052(-) A-I      intronic
chr15:59014652(-) A-I      intronic
chr15:59005465(-) A-I      intronic
chr15:59018652(-) A-I      intronic
chr15:59013901(-) A-I      intronic
chr15:58897225(-) A-I      intronic
chr15:59004692(-) A-I      intronic
chr15:59007438(-) A-I      intronic
chr15:59011383(-) A-I      intronic
chr15:59019669(-) A-I      intronic
chr15:58958191(-) A-I      intronic
chr15:59015804(-) A-I      intronic
chr15:59019583(-) A-I      intronic
chr15:58896310(-) A-I      intronic
chr15:58912414(-) A-I      intronic
chr15:58967315(-) A-I      intronic
chr15:59015099(-) A-I      intronic
chr15:58972024(-) A-I      intronic
chr15:58988941(-) A-I      intronic
chr15:58952066(-) A-I      intronic
chr15:59019334(-) A-I      intronic
chr15:58971916(-) A-I      intronic
chr15:59035123(-) A-I      intronic
chr15:59015756(-) A-I      intronic
chr15:58952092(-) A-I      intronic
chr15:58951372(-) A-I      intronic
chr15:59019212(-) A-I      intronic
chr15:59031462(-) A-I      intronic
chr15:58951259(-) A-I      intronic
chr15:58952194(-) A-I      intronic
chr15:59032429(-) A-I      intronic
chr15:59004497(-) A-I      intronic
chr15:59015085(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ADAM10
chr15:58978825(-) A-I intron -    22327324
chr15:58897079(-) A-I intron -    21960545
chr15:58897225(-) A-G intron -    22484847
chr15:58951255(-) A-G intron -    22484847
chr15:58951259(-) A-G intron -    22484847
chr15:58951360(-) A-G intron -    22484847
chr15:58951372(-) A-G intron -    22484847
chr15:58952194(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADAM10
chr15:58884082-58884083(-) m6A 3'UTR       -
chr15:58884095-58884096(-) m6A 3'UTR       -
chr15:58884117-58884118(-) m6A 3'UTR       -
chr15:58884128-58884129(-) m6A 3'UTR       -
chr15:58884151-58884152(-) m6A 3'UTR       -
chr15:58884171-58884172(-) m6A 3'UTR       -
chr15:58884213-58884214(-) m6A 3'UTR       -
chr15:58884221-58884222(-) m6A 3'UTR       -
chr15:58884231-58884232(-) m6A 3'UTR       -
chr15:58884251-58884252(-) m6A 3'UTR       -
chr15:58884269-58884270(-) m6A 3'UTR       -
chr15:58884277-58884278(-) m6A 3'UTR       -
chr15:58887409-58887410(-) m6A 3'UTR       27773535
chr15:58887420-58887421(-) m6A 3'UTR       27773535
chr15:58887559-58887560(-) m6A 3'UTR       27773535
chr15:58887568-58887569(-) m6A 3'UTR       27773535
chr15:58887627-58887628(-) m6A 3'UTR       27773535
chr15:58887763-58887764(-) m6A 3'UTR       27773535
chr15:58887809-58887810(-) m6A 3'UTR       27773535
chr15:58887928-58887929(-) m6A 3'UTR       27773535
chr15:58887936-58887937(-) m6A 3'UTR       27773535
chr15:58888024-58888025(-) m6A 3'UTR       24981863//26404942//22608085
chr15:58888087-58888088(-) m6A 3'UTR       26404942//22608085
chr15:58888104-58888105(-) m6A 3'UTR       26404942
chr15:58888115-58888116(-) m6A 3'UTR       26404942
chr15:58888133-58888134(-) m6A 3'UTR       26404942
chr15:58888900-58888901(-) m6A 3'UTR       26404942
chr15:58888966-58888967(-) m6A 3'UTR       24981863//26404942
chr15:58888971-58888972(-) m6A 3'UTR       24981863//26404942
chr15:58888992-58888993(-) m6A 3'UTR       24981863//26404942
chr15:58889243-58889244(-) m6A 3'UTR       27773535
chr15:58889287-58889288(-) m6A 3'UTR       26404942//27773535
chr15:58889324-58889325(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085
chr15:58889405-58889406(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr15:58889421-58889422(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr15:58889519-58889520(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr15:58889536-58889537(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr15:58889603-58889604(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr15:58889654-58889655(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr15:58889659-58889660(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr15:58889682-58889683(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr15:58889700-58889701(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr15:58889760-58889761(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//26404942//22608085
chr15:58889820-58889821(-) m6A 3'UTR//CDS//exon//intron       24209618//24981863//26404942
chr15:58891806-58891807(-) m6A 3'UTR//CDS//exon//intron       26404942
chr15:58903964-58903965(-) m6A exon//intron       26404942
chr15:58904040-58904041(-) m6A 3'UTR//CDS//exon//intron       26404942
chr15:58904049-58904050(-) m6A 3'UTR//CDS//exon//intron       26404942
chr15:58904054-58904055(-) m6A 3'UTR//CDS//exon//intron       26404942
chr15:58904115-58904116(-) m6A 3'UTR//CDS//exon//intron       26404942
chr15:58913677-58913678(-) m6A 3'UTR//CDS//exon//intron       22575960
chr15:58913686-58913687(-) m6A 3'UTR//CDS//exon//intron       22575960
chr15:58913692-58913693(-) m6A 3'UTR//CDS//exon//intron       22575960
chr15:58913782-58913783(-) m6A 3'UTR//CDS//exon//intron       22575960
chr15:58919912-58919913(-) m6A 3'UTR//CDS//exon//intron       26404942//22575960
chr15:58919984-58919985(-) m6A 3'UTR//CDS//exon//intron       26404942
chr15:58920069-58920070(-) m6A 3'UTR//CDS//exon//intron       26404942//27773535
chr15:58921505-58921506(-) m6A exon//intron       27773535
chr15:58925412-58925413(-) m6A 3'UTR//CDS//intron       26404942
chr15:58925470-58925471(-) m6A 3'UTR//CDS//intron       26404942
chr15:58925494-58925495(-) m6A 3'UTR//CDS//intron       26404942
chr15:58925526-58925527(-) m6A 3'UTR//CDS//intron       26404942
chr15:58933028-58933029(-) m6A 3'UTR//CDS//intron       26404942
chr15:58933133-58933134(-) m6A 3'UTR//CDS//intron       26404942
chr15:58936130-58936131(-) m6A 3'UTR//CDS//intron       26404942
chr15:58936137-58936138(-) m6A 3'UTR//CDS//intron       26404942
chr15:58938276-58938277(-) m6A 3'UTR//CDS//intron       26404942
chr15:58938306-58938307(-) m6A 3'UTR//CDS//intron       26404942
chr15:59009811-59009812(-) m6A CDS//exon//intron       26404942//27773535
chr15:59009846-59009847(-) m6A CDS//exon//intron       26404942//27773535
chr15:59009891-59009892(-) m6A CDS//exon//intron       24981863//26404942//27773535
chr15:59040680-59040681(-) m6A 3'UTR//intron       24981863//26404942//27773535
chr15:59040711-59040712(-) m6A 3'UTR//intron       24981863//27773535
chr15:59041046-59041047(-) m6A 3'UTR//exon//intron       24209618
chr15:59041178-59041179(-) m6A CDS//intron       24209618//27371828
chr15:59041191-59041192(-) m6A CDS//intron       24209618//27371828
chr15:59041818-59041819(-) m6A 5'UTR//exon       24209618//25456834//24981863//27773535//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ADAM10
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART10-5p
Interactor2: ADAM10

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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