Basic Information:

  VIRBase ID:  

VHID00398517

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART9-5p:  MIMAT0004816          FSD2:  NM_001007122     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART9-5p	FSD2
miRBase Accession/Entrez ID	MIMAT0004816	123722
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SPRYD1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FSD2	chr15:83444930(-) A-I      intronic chr15:83444927(-) A-I      intronic chr15:83444854(-) A-I      intronic chr15:83444956(-) A-I      intronic chr15:83464489(-) A-I      intronic chr15:83464472(-) A-I      intronic chr15:83445006(-) A-I      intronic chr15:83464414(-) A-I      intronic chr15:83464462(-) A-I      intronic chr15:83464460(-) A-I      intronic chr15:83442939(-) A-I      intronic chr15:83444923(-) A-I      intronic chr15:83441872(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FSD2	chr15:83442925(-) T-C intron -    22484847 chr15:83442928(-) T-C intron -    22484847 chr15:83442951(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FSD2	chr15:83455850-83455851(-) m6A CDS       - chr15:83455861-83455862(-) m6A CDS       - chr15:83455905-83455906(-) m6A CDS       - chr15:83455923-83455924(-) m6A CDS       - chr15:83455945-83455946(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FSD2	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART9-5p
Interactor2: FSD2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg